TTTTTACCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAAATCC
GCGGAATTCTCTGCCTTTCACATACATTATTTCATAGGAGACATAGAATT
CACTCATCATCCCGGAACTCATGATGGGGAACGTATTCCCCATCTCTTTA
GTGGAATGGAAACAATGCCGATGTTCACATCTAAATAATCAAGCTTGGGG
CAAGCCAACAGCAGCCTAGGATATGAGTTTATCGGATCTGATTTGCTGAT
GGTTTAAACACTTAGGAGCAGACAGCTATAGGAGCCAATTAAACCTCTCC
AAGGTGCACAGAAGGATCTCTTTGTGAGAAATGATTTAAGGGAATTGCAT
TGGCCCTGGAACTGGAGGGGAGCAAAAGCACTAGGGATGAAATTTCAGAT
GCACAGCACTGAGCACCCCACCTCCCTTTTTTGTTTTTGTTTTTTTTAAT
TTTTTTAAATTAAAAAATTTTTTTTGTTAGCTTCACGCTGTTTGGGTGGC
TGCTGTTTTATGGGACGGGTGTGCACTTCTATTTTGCAAGCTGAAGGTTA
TGCTAAACTTTTTCTCTGTGAAAATTTCTCCCCTTTGGCTATTGATTATG
ATGGTGCCTTTAAACGAAGCCTTGTGTCTAAAAGAGTAACACAAAAACAA
AAACAAAAAAACCATGTCAGTACATCCTGTTCCTCTCAGATATTGCATCT
TTATTAGTGTACCGGAAATCCCAGTTTAAAGTAATGACAAAA

GGGGNAACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGAGCTTGAATAAGACG
CAAAGAAACAGCTCAATGAAATTAAGGAGAAAAAACTAAAGGAGAATAGA
TGCCAGAGTGATTCCCAGGAAAGACAAAGCCCAAAAGAAATGGATGACTT
TCTAGATTCTGCCAAACCACCAAAAGTTAAACAAAAGAAAAAGTAAAAAG
AAAAACCTAAAAAGACCCATAACAAAGAAGGTTATTAAACTAATAATGAA
AAGCCTTCCAATTAAAACTGTCCAGGCCAAGATGGATCCACAACAGAATT
TTATAGCCAGTCTTTCTTAAACTATTTTTAAAAAGATAGAAGCAGGAGAA
CACACTTCAACATAATAAAAGCAACATATGAGGAATCTACAGCCAACGTC
ATCCTAAATGGAGAAAAGCTTGAAGCAATTCTACTGACGTCAGAGATGAG
ACAGAGATGGCCACCCTCCCCACTCCTTTTCAATAATGTACAGGAGGCAC
TAGTTGGAGCAATAAAGCGGAAGAAAGTTAAAGAGTTGCAAATAGGAAAA
AAAGTCATTAAACTCTCCCTACTTATAGATGACATATTATACATTAGTGA
TCCCCAAAATTCTACTAAGAACACTTCTAGAAATGCTAAACAAAGCCAAC
AGTGTGAGAGAGCACAGAATCAACATACACATGTGGATAGCCTCTCTACN
CNCACAACAAACATATAGAGGAAGG

Query= MSMg01no485_g19.b1 MSMg01no485_g19.b1 CHROMAT_FILE:
MSMg01no485_g19.b1 PHD_FILE: MSMg01no485_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:22 2005
         (609 letters)



>mm_chr11_44754579_44755587
          Length = 1009

 Score = 1162 bits (601), Expect = 0.0
 Identities = 607/609 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   attatttcataggagacatagaattcactcatcatcccggaactcatgatggggaacgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attatttcataggagacatagaattcactcatcatcccggaactcatgatggggaacgta 260

                                                                       
Query: 61  ttccccatctctttagtggaatggaaacaatgccgatgttcacatctaaataatcaagct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccccatctctttagtggaatggaaacaatgccgatgttcacatctaaataatcaagct 320

                                                                       
Query: 121 tggggcaagccaacagcagcctaggatatgagtttatcggatctgatttgctgatggttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggggcaagccaacagcagcctaggatatgagtttatcggatctgatttgctgatggttt 380

                                                                       
Query: 181 aaacacttaggagcagacagctataggagccaattaaacctctccaaggtgcacagaagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacacttaggagcagacagctataggagccaattaaacctctccaaggtgcacagaagg 440

                                                                       
Query: 241 atctctttgtgagaaatgatttaagggaattgcattggccctggaactggaggggagcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctctttgtgagaaatgatttaagggaattgcattggccctggaactggaggggagcaa 500

                                                                       
Query: 301 aagcactagggatgaaatttcagatgcacagcactgagcaccccacctcccttttttgtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagcactagggatgaaatttcagatgcacagcactgagcaccccacctcccttttttgtt 560

                                                                       
Query: 361 tttgttttttttaatttttttaaattaaaaaattttttttgttagcttcacgctgtttgg 420
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 tttgttttttttaatttttttaaattaaaaaaatttttttgttagcttcacgctgtttgg 620

                                                                       
Query: 421 gtggctgctgttttatgggacgggtgtgcacttctattttgcaagctgaaggttatgcta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtggctgctgttttatgggacgggtgtgcacttctattttgcaagctgaaggttatgcta 680

                                                                       
Query: 481 aactttttctctgtgaaaatttctcccctttggctattgattatgatggtgcctttaaac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aactttttctctgtgaaaatttctcccctttggctattgattatgatggtgcctttaaac 740

                                                                       
Query: 541 gaagccttgtgtctaaaagagtaacacaaaaacaaaaacaaaaaaaccatgtcagtacat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaagccttgtgtctaaaagagtaacacaaaaacaaaaacaaaaaaaccatgtcagtacat 800

                    
Query: 601 cctgttcct 609
            ||||||||
Sbjct: 801 tctgttcct 809


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space:   598401
Effective search space used:   598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)