Query= MSMg01no485_m08.b1 MSMg01no485_m08.b1 CHROMAT_FILE:
MSMg01no485_m08.b1 PHD_FILE: MSMg01no485_m08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:51 2005
(294 letters)
>mm_chr11_32750051_32750744
Length = 694
Score = 489 bits (253), Expect = e-143
Identities = 265/271 (97%), Gaps = 4/271 (1%)
Strand = Plus / Plus
Query: 1 gagggcactgatgcgttcagcattgcactgatctctgtctatctctctccctcactggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagggcactgatgcgttcagcattgcactgatctctgtctatctctctccctcactggct 260
Query: 61 cactctgtagcccactgaagggaagattcccaccagctctagatttatgcacgtgaacgt 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactctgtagcccactgtagggaagattcccaccagctctagatttatgcacgtgaacgt 320
Query: 121 tcctggcggaaaagaggtccttctttctttttttctttctgtttttccttccttccttct 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctggtggaaaagaggtccttctttctttttttctttctgtttttccttccttccttct 380
Query: 181 tttttcctttctccctccctccctccctccctccctcctttcctctctttctctttcctc 240
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 tttttcctttctccctccctccctccctccctcc----tttcctctctttctctttcctc 436
Query: 241 tctctctctctctctctctctctctctctct 271
|||||||||||||||||||||||||||||||
Sbjct: 437 tctctctctctctctctctctctctctctct 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no485_m08.g1 MSMg01no485_m08.g1 CHROMAT_FILE:
MSMg01no485_m08.g1 PHD_FILE: MSMg01no485_m08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:51 2005
(555 letters)
>mm_chr11_32930857_32931811
Length = 955
Score = 582 bits (301), Expect = e-170
Identities = 310/313 (99%), Gaps = 1/313 (0%)
Strand = Plus / Minus
Query: 244 attttttgatgcctgtttgttttctgatgtcagggagaaagaaaggggtttggaagagag 303
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 955 attttttgatgcctgtttgttttctgatgtcagggagaaagaaagcggtttggaagagag 896
Query: 304 tggattcggatgggtagagaggtggggagcatctgggagaaactgggggacagggaactg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tggattcggatgggtagagaggtggggagcatctgggagaaactgggggacagggaactg 836
Query: 364 taaccacaatatattgtatg-aaaaaatccatttttaactttaaaattaaaaaatttaat 422
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 835 taaccacaatatattgtatgaaaaaaatccatttttaactttaaaattaaaaaatttaat 776
Query: 423 taatttaaaaaagaaaatttgaaagaaagaaaaaacaaaacgtagaactctatgatgggt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 taatttaaaaaagaaaatttgaaagaaagaaaaaacaaaacgtagaactctatgatgggt 716
Query: 483 atacactcccagatagccactcaaagtaagttaacactacaaaaagatgctctcatactc 542
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 atacactctcagatagccactcaaagtaagttaacactacaaaaagatgctctcatactc 656
Query: 543 atgtttactgttc 555
|||||||||||||
Sbjct: 655 atgtttactgttc 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
