Query= MSMg01no485_o09.b1 MSMg01no485_o09.b1 CHROMAT_FILE:
MSMg01no485_o09.b1 PHD_FILE: MSMg01no485_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:02 2005
(589 letters)
>mm_chr11_25517429_25518418
Length = 990
Score = 1065 bits (551), Expect = 0.0
Identities = 569/575 (98%), Gaps = 2/575 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcagtgttgctagcttatgaaag-aaaaaacgattaatagtccatttagctat 62
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 575 ggaattctcagtgttgctagcttatgaaagaaaaaaacgattaatagtccatttagctat 516
Query: 63 tttactttcttgcttcagcagaaggtaatttattagatttggctaatgatgttttctcct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tttactttcttgcttcagcagaaggtaatttattagatttggctaatgatgttttctcct 456
Query: 123 ccccttgttagataaggagcagaatcaacaataaatatgtcacatctgtgtgggagctgg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ccccttgttagataaggagcagaatcaacaataaatatgtcacatctgtgtgggagctgg 396
Query: 183 ttcaacaagagcctcagccacatacagcaacaattgcagctttctgactgtctcctgaat 242
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 395 ttcaacaagagcctcagccacatagagcaacaattgcagctttctgactgtctcctgaat 336
Query: 243 gggttgggtggaggccatgtatgtggatgctcctatcctgaaagcacaaagctgtgaatg 302
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gggttgggtggacgccatatatgtggatgctcctatcctgaaagcacaaagctgtgaatg 276
Query: 303 ttaagcattgtcaacagtgtcatcacttcctaaaaagaaaatgagagaaaaaggtgggtg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttaagcattgtcaacagtgtcatcacttcctaaaaagaaaatgagagaaaaaggtgggtg 216
Query: 363 agatgccaccccggtaaaagcatttgctgctaagtctgatgaactgatcttaagccctaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 agatgccaccccggtaaaagcatttgctgctaagtctgatgaactgatcttaagccctaa 156
Query: 423 gacccacatagtggaaagagaaaaacaaccctcactagttattctttgacttccatacat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gacccacatagtggaaagagaaaaacaaccctcactagttattctttgacttccatacat 96
Query: 483 gttccatgccacatgtgtgtgctcatacaataattattttttt-aacgaaagtaacagaa 541
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 95 gttccatgccacatgtgtgtgctcacacaataattattttttttaacgaaagtaacagaa 36
Query: 542 atagccttgacacctaaatcagaatatcttgctat 576
|||||||||||||||||||||||||||||||||||
Sbjct: 35 atagccttgacacctaaatcagaatatcttgctat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 990
Length adjustment: 10
Effective length of query: 579
Effective length of database: 980
Effective search space: 567420
Effective search space used: 567420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_o09.g1 MSMg01no485_o09.g1 CHROMAT_FILE:
MSMg01no485_o09.g1 PHD_FILE: MSMg01no485_o09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:02 2005
(653 letters)
>mm_chr11_25499171_25500223
Length = 1053
Score = 1154 bits (597), Expect = 0.0
Identities = 638/652 (97%)
Strand = Plus / Plus
Query: 1 tagttgagctcttactattcaaagccaaataacctgagaatgtaataatgcagaaagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagttgagctcttactattcaaagccaaataacctgagaatgtaataatgcagaaagctg 260
Query: 61 cctgaggttcctttgtctttggtcaggtaaaatcaattcagttattgggcacagagcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgaggttcctttgtctttggtcaggtaaaatcaattcagttattgggcacagagcagt 320
Query: 121 gtataaacagcatggcttcagtcagcaatccctgtcagagattgggttgcatgtgggttg 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 gtataaacagcatggcttcagtcagcaatccctgtcagagagtgggttgcatgtgggttg 380
Query: 181 catgggtaatattccatatgctgatttactaagcattgtcaagagagaaacggagaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgggtaatattccatatgctgatttactaagcattgtcaagagagaaacggagaaatt 440
Query: 241 catcttatgtagggaaattccttctaaggaattattaagaattagaaaagacaagaggga 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 catcttatgtagggaaattccttctaaggaactattaagaattagaaaagacaagaggga 500
Query: 301 agaaatatcaagacaaagcctttaaaatgaagtattctacctgcctctatcctggggcat 360
|||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 501 agaaatatcaggacaaagcctctaaaatgaagtgctctacctgcctctatcctggggcat 560
Query: 361 ttggtccaaggcagaatctccaggaacaatgttttcccctctattctttataaagggact 420
||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||
Sbjct: 561 ttggtccaaggcagaatctccgggaacaacgttttcccctctgttctttataaagggact 620
Query: 421 gtttgccaggcttcctgtgagtaggaaggaaatgaacgactggcatgaggctgcacatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtttgccaggcttcctgtgagtaggaaggaaatgaacgactggcatgaggctgcacatca 680
Query: 481 gtggggaactgaatcagggaaagtaagctggctggtgaatgtggcattgtggattccata 540
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 681 gtggggaactgaatcagggagagtaagctggctggtgaatgtggcattgtgaattccata 740
Query: 541 gaatagatgcacagtgactganaggaagaaaatgactaggcctttcttaaaactataaca 600
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 741 gaatagatgcacagtgactgaaaggaagaaaatggctaggcctttcttaaaactataaca 800
Query: 601 attagccaattgagctaactaataggatctgagaagatgtaagtaagtgggg 652
||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 801 attagccaattgagctaactaataggatctgagaagatgcaagtaagtgggg 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
