Query= MSMg01no490_p15.b1 MSMg01no490_p15.b1 CHROMAT_FILE:
MSMg01no490_p15.b1 PHD_FILE: MSMg01no490_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:43 2005
(381 letters)
>mm_chr11_40211864_40212643
Length = 780
Score = 690 bits (357), Expect = 0.0
Identities = 375/381 (98%), Gaps = 1/381 (0%)
Strand = Plus / Plus
Query: 1 acaccgagacagcatcacagaggagctctgggctgctgtctttcttgctttcagagaaga 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 acaccgagacagcaccacagaggagctctgggctgctgtctttcttgctttcagagagga 260
Query: 61 agccagcatcccgcagcacaagagcactaattgaatttaagagacataatgaatgggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccagcatcccgcagcacaagagcactaattgaatttaagagacataatgaatgggaag 320
Query: 121 cacacacaagcacaccctactgtgttcaagatgatggtgtaggcctgaccggagatgtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacacacaagcacaccctactgtgttcaagatgatggtgtaggcctgaccggagatgtgg 380
Query: 181 ggttacaagttagaagttgcatagcccagccagaaagaccaagatgtggcattgtgctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggttacaagttagaagttgcatagcccagccagaaagaccaagatgtggcattgtgctgt 440
Query: 241 taaatgacatctgaacaaggaagcaggtgaaggtaggagacaataaaattctgattgtgt 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 taaatgacatctgaacaaggaagcag-tgaaggtaggagacaataaaattctgattgtgt 499
Query: 301 tctggcttcagaaaactttttgtgatctgaatactctaatagaggactgaagagatggtg 360
||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||
Sbjct: 500 tctggcttcagaaaactttttgtgaccagaatactctgatagaggactgaagagatggtg 559
Query: 361 cagggagtaaggcatttgtca 381
|||||||||||||||||||||
Sbjct: 560 cagggagtaaggcatttgtca 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 780
Length adjustment: 9
Effective length of query: 372
Effective length of database: 771
Effective search space: 286812
Effective search space used: 286812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_p15.g1 MSMg01no490_p15.g1 CHROMAT_FILE:
MSMg01no490_p15.g1 PHD_FILE: MSMg01no490_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:43 2005
(681 letters)
>mm_chr11_40372547_40373627
Length = 1081
Score = 708 bits (366), Expect = 0.0
Identities = 378/382 (98%), Gaps = 1/382 (0%)
Strand = Plus / Minus
Query: 301 ccatgtggttgttgggaattgaactcatgacctctggaagagcagtcagtgcttttaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ccatgtggttgttgggaattgaactcatgacctctggaagagcagtcagtgcttttaacc 1022
Query: 361 actgagccatctcaccagcccatgtaaatctttagttcacagaatctgatgccctcttcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1021 actgagccatctcaccagcccatgtaaatctttagttcacagaatctgatgtcctcttcg 962
Query: 421 ggcctccatgagcacaaggcagacacacagtattgaaacatatgtgtaggcaaggacacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggcctccatgagcacaaggcagacacacagtattgaaacatatgtgtaggcaaggacacc 902
Query: 481 catacacataaaataaagtaaaaaaaaaaa-ttctactactttagggaattgatatggaa 539
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 901 catacacataaaatgaagtaaaaaaaaaaaattctactactttagggaattgatatggaa 842
Query: 540 atacatgcatttactgatagctcctgtccagttttgatattaatcacaatcattaataca 599
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 841 atacatgcatttactgatagctcctgtccagttttgttattaatcacaatcattaataca 782
Query: 600 catacacctttgtccattccatgctatgtacacagcatcacttagaagaaaacagtatgc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 catacacctttgtccattccatgctatgtacacagcatcacttagaagaaaacagtatgc 722
Query: 660 caaacgctgtgatgggtgttca 681
||||||||||||||||||||||
Sbjct: 721 caaacgctgtgatgggtgttca 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
