TTATTTTTTCNNCCCCTNNNNNTTCTATXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCGCGGAATTCAGTTTGGATATCCTCAGAAAAT
TGGATATAGTACTACCTGAGGACCCAGCTATACCACTCCTGGGCATATAC
CCAGAAGATGTTCCAACATGTCATAAGGACACATGTTCCACTATGTTCAT
AGCAGTCTTATTTATAACAGCCAGAAGCTGGAAAGAACCCAGATACAGGA
ATGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTA
TTAAAAACAATGATTTCATGAAATTCTTTAAACCATTGCCTAGAACCTGA
AAATTATCCTCCTGAGTAAGGTAACCCCAATCGCAAAAAAACCCCCTTGA
AATGCCCCCCCCCGGAAAAAAGGGGAAAATTTTAATTCCCCAAAAAATGT
TCCCCCAAATATACCCCCCCAAAAAAAAAAAAATTTTTTCCCAACCCCCC
CCTTGGAGTCTCTCCAAAAAAAAAAAAGGCCCCCCCAAAAAGTGGGGGGG
GCTTTTTGGGCCCCCTTTTAAAAAAGAGAAAAAAAAAAAAATCCCCCCCA
AAAAAAAAAATTTGGTGAGAAAAAAGGGGTGGGGCGCCCCATAATTTTCT
GGGGGGGAGGGGGGCCCCCCAAAAAAAATGTGTCCCCCCCCCCCGGGGGG
TGTCTCCCCCCCCC

CAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCATGGAAACTATAAAAGTGTCAGCC
ACATTTGCTTTTCATTGCAACATTATTTGGAATTATGACTGTGTTTTATA
GTTGCCAGAGTCTGTCCGTGGCCATGCACAGCTTCAACAATCCATTGTGG
CCGGCAGGACAGATCTGACTGTTCTCTTAGGCATAAAGGAAGGCTGAGAC
ACTTCACCAAAACACCATCGTCTGTAAAATTTCCTTGCACAGTTGTTGCT
TGCTCGCTGGTCCTCCATACCTGGGAGGAAAGGACAGGGGGGCTCCAGAG
GTGGCTCAGTTGGTAACTTGCCCGCATGTGAGTGTGAGGACATGAGTTCA
TATCCCCAGCACCCATGTTAAAAGCTTGGTGTGGCTGTGCACACACACAG
ATCTAGAGTTGTGGAGGAGGAGGTAGATGGTTTCCAAGGTTCATTGGCCA
GCCAATTTATCCAACTAGTGAGTGATGGGTTTAGTGAGAGACAGTCTCAA
AAAATAAGATTGAAGGTGATCAAGGATGATGCCTGACATCAACTTTTGGC
TTCCACATACATACATACATACATGCACACAAATATGAACATGCACATAC
ATACACACATGCACATGCACACATGCATACACACATATACACATATACAA
AATTATGAACATGTACACACACATATATTATGCCATTACCCAGTGTATAA

Query= MSMg01no493_d01.g1 MSMg01no493_d01.g1 CHROMAT_FILE:
MSMg01no493_d01.g1 PHD_FILE: MSMg01no493_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:38 2005
         (660 letters)



>mm_chr11_90327605_90328661
          Length = 1057

 Score = 1253 bits (648), Expect = 0.0
 Identities = 656/660 (99%), Gaps = 3/660 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   catggaaactataaaagtgtcagccacatttgcttttcattgcaacattatttggaatta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catggaaactataaaagtgtcagccacatttgcttttcattgcaacattatttggaatta 260

                                                                       
Query: 61  tgactgtgttttatagttgccagagtctgtccgtggccatgcacagcttcaacaatccat 120
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaatgtgttttatagttgccagagtctgtccgtggccatgcacagcttcaacaatccat 320

                                                                       
Query: 121 tgtggccggcaggacagatctgactgttctcttaggcataaaggaaggctgagacacttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtggccggcaggacagatctgactgttctcttaggcataaaggaaggctgagacacttc 380

                                                                       
Query: 181 accaaaacaccatcgtctgtaaaatttccttgcacagttgttgcttgctcgctggtcctc 240
           ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accaaaacacca---tctgtaaaatttccttgcacagttgttgcttgctcgctggtcctc 437

                                                                       
Query: 241 catacctgggaggaaaggacaggggggctccagaggtggctcagttggtaacttgcccgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 catacctgggaggaaaggacaggggggctccagaggtggctcagttggtaacttgcccgc 497

                                                                       
Query: 301 atgtgagtgtgaggacatgagttcatatccccagcacccatgttaaaagcttggtgtggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atgtgagtgtgaggacatgagttcatatccccagcacccatgttaaaagcttggtgtggc 557

                                                                       
Query: 361 tgtgcacacacacagatctagagttgtggaggaggaggtagatggtttccaaggttcatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tgtgcacacacacagatctagagttgtggaggaggaggtagatggtttccaaggttcatt 617

                                                                       
Query: 421 ggccagccaatttatccaactagtgagtgatgggtttagtgagagacagtctcaaaaaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ggccagccaatttatccaactagtgagtgatgggtttagtgagagacagtctcaaaaaat 677

                                                                       
Query: 481 aagattgaaggtgatcaaggatgatgcctgacatcaacttttggcttccacatacataca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aagattgaaggtgatcaaggatgatgcctgacatcaacttttggcttccacatacataca 737

                                                                       
Query: 541 tacatacatgcacacaaatatgaacatgcacatacatacacacatgcacatgcacacatg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tacatacatgcacacaaatatgaacatgcacatacatacacacatgcacatgcacacatg 797

                                                                       
Query: 601 catacacacatatacacatatacaaaattatgaacatgtacacacacatatattatgcca 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 catacacacatatacacatatacaaaattatgaacatgtacacacacatatattatgcca 857


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1057
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1047
Effective search space:   680550
Effective search space used:   680550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)