AAAAGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTGTTATTTAATTCTACAACAGCTATTATTTGTGTGTTGAACAACTG
CTGAATTCTTGGACACTGCTGGTTGACATCCACCTTTGGACTAGATGAAC
CACAGTGATTATAATAAATCTCTTTTCTATAAATATAGTGAGATTCATTC
TATAAATTCTGTTATTAGAGGATAATAAAATAAGCACATAGTTAACCATC
CTCCACACCTTCTCCATCTAATCTCCCCATATTACCACTTGATTTTCACC
ATTACCTGTATCACATATCTGTAATCTCATATTAAGTTGGATAGAAGGCT
GATTACTGCTTGAATTTATGAAAGAAAGATAAATGTAACTACAAGGGGTC
TTTCCCTATCTTTTCCTTTCTTATTGTCAAGTATATGATTGATATTACAT
AGGGTAAGATATATACTTGCTGAAGTAGTAATGTTGCATATTATCTCTTC
GGGAAAATTGAAATTCTAATTTCAAATTAGAAATTCCTGGTAAAAAATTC
CTGGTGTTCTCAGTGATACAATGGGTAAACCTTTTACTATGATGATACAA
ATTTATAACAAGCACCAGGAAGTTTAGCAAATATATAATATATTTACAGT
CATTAATTGAATCAAAAGACACATTAGGAGGATTTAAGAGTCTTTCTATT
TGATTTTCTGTTTGCATTTCATTAGTTACCTATCCTTTCTTCCCTN

TGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATGTGTCAATAGGAAAAAACCAGCAGTCT
ACAGGGTTGAAAAAGATCTTCACTAATCTTGCATGCAACAGCGGACTAAT
AACCAAAATATATAAAAACTCAAGAAATTAGATACCAACAAGCAAAATAA
AACAATTTAAAATAGGGTAAATCGAGAATTCTCAAAAGAGTAATCGTGAA
TGGCTTAGAAGCACTTAAAATGTTCAACATCTTTAGTCATCAGAGAAATG
CAAATGCATATGACACTGAGATTCCATCTTACAACCATCAGAACAGCTAA
GAATAAAATCTCAAGAGACAGAACATGCCAGTGAGGATGAGGAGCAAAGA
GAACACTCCTCCATTAATTGTGGGAGAGCAAACATGTACAACCACTCTAG
AAATCAATCTGGCACTTTCTCAGAAAATAGGTAATAGTTTTACCTGAAGA
CCCAGCTATACTACTTCTGGGCGTATACCCAAAAGATGTTCTACCACATC
ACAAGGATACATGTACCACTATGTTCATAGGAGCTTTATTTGTAATAAAC
AGAAACTGGGAAAAAAAAAACTAGATGCCCCTCAACTAAGAAACAGATAC
AGAAAATGTGATTCATGTATACAAGGGAATACTATTCAGGTTTTTAAAAA
AGGGACATCATGTATTTTGCAGGCATGGAAAGTGGTTGGAACTAGAAAAT
ATCATTCTG

Query= MSMg01no493_h02.b1 MSMg01no493_h02.b1 CHROMAT_FILE:
MSMg01no493_h02.b1 PHD_FILE: MSMg01no493_h02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:58 2005
         (701 letters)



>mm_chr11_27631960_27633060
          Length = 1101

 Score = 1319 bits (682), Expect = 0.0
 Identities = 694/698 (99%)
 Strand = Plus / Minus

                                                                        
Query: 4    ggaattctttgttatttaattctacaacagctattatttgtgtgttgaacaactgctgaa 63
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 ggaattctttgttatttaattctacaacagctattatttgtgtgttgaacaactgctgaa 1019

                                                                        
Query: 64   ttcttggacactgctggttgacatccacctttggactagatgaaccacagtgattataat 123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 ttcttggacactgctggttgacatccacctttggactagatgaaccacagtgattataat 959

                                                                        
Query: 124  aaatctcttttctataaatatagtgagattcattctataaattctgttattagaggataa 183
            |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 958  aaatctcttttctataaatatagtgagattcactctataaactctgttattagaggataa 899

                                                                        
Query: 184  taaaataagcacatagttaaccatcctccacaccttctccatctaatctccccatattac 243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898  taaaataagcacatagttaaccatcctccacaccttctccatctaatctccccatattac 839

                                                                        
Query: 244  cacttgattttcaccattacctgtatcacatatctgtaatctcatattaagttggataga 303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838  cacttgattttcaccattacctgtatcacatatctgtaatctcatattaagttggataga 779

                                                                        
Query: 304  aggctgattactgcttgaatttatgaaagaaagataaatgtaactacaaggggtctttcc 363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778  aggctgattactgcttgaatttatgaaagaaagataaatgtaactacaaggggtctttcc 719

                                                                        
Query: 364  ctatcttttcctttcttattgtcaagtatatgattgatattacatagggtaagatatata 423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718  ctatcttttcctttcttattgtcaagtatatgattgatattacatagggtaagatatata 659

                                                                        
Query: 424  cttgctgaagtagtaatgttgcatattatctcttcgggaaaattgaaattctaatttcaa 483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658  cttgctgaagtagtaatgttgcatattatctcttcgggaaaattgaaattctaatttcaa 599

                                                                        
Query: 484  attagaaattcctggtaaaaaattcctggtgttctcagtgatacaatgggtaaacctttt 543
            |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 598  attagaaaatcctggtaaaaacttcctggtgttctcagtgatacaatgggtaaacctttt 539

                                                                        
Query: 544  actatgatgatacaaatttataacaagcaccaggaagtttagcaaatatataatatattt 603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538  actatgatgatacaaatttataacaagcaccaggaagtttagcaaatatataatatattt 479

                                                                        
Query: 604  acagtcattaattgaatcaaaagacacattaggaggatttaagagtctttctatttgatt 663
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478  acagtcattaattgaatcaaaagacacattaggaggatttaagagtctttctatttgatt 419

                                                  
Query: 664  ttctgtttgcatttcattagttacctatcctttcttcc 701
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 418  ttctgtttgcatttcattagttacctatcctttcttcc 381


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1101
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1091
Effective search space:   753881
Effective search space used:   753881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)