MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-493K12
Chromosome	11 (Build37)
Map Location	87,498,385 - 87,498,897
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ptrh2, Cltc, Dhx40, Ypel2, Gdpd1, 1200011M11Rik, LOC668816, Prr11, 1110001A07Rik, Trim37, Ppm1e, Rad51c, Tex14, Sept4, Mtmr4, Hsf5
Downstream gene	Rnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx, Olfr462, Olfr463, Olfr464, Dynll2, Sfrs1, Vezf1, Cuedc1, Mrps23, 1700106J16Rik, LOC668793, Msi2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ptrh2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217057 MGI:2444848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cltc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67300 MGI:2388633
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhx40 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67487 MGI:1914737
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ypel2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77864 MGI:1925114
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gdpd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66569 MGI:1913819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1200011M11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74133 MGI:1921383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668816 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668816
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 8 Proteins pseudo : _no_value

name	Prr11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270906 MGI:2444496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110001A07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66140 MGI:1913390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trim37 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68729 MGI:2153072
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppm1e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320472 MGI:2444096
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rad51c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114714 MGI:2150020
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tex14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83560 MGI:1933227
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sept4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18952 MGI:1270156
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtmr4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170749 MGI:2180699
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hsf5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:327992 MGI:2685585
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf43 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207742 MGI:2442609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Supt4h1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20922 MGI:107416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bzrap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207777 MGI:2450877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mpo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17523 MGI:97137
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lpo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76113 MGI:1923363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mks1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380718 MGI:3584243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13861 MGI:107569
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr462 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258406 MGI:3030296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr463 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258408 MGI:3030297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr464 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258407 MGI:3030298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dynll2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68097 MGI:1915347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfrs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110809 MGI:98283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Vezf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22344 MGI:1313291
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cuedc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103841 MGI:2144281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrps23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64656 MGI:1928138
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700106J16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74297 MGI:1921547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs

name	LOC668793 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Msi2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76626 MGI:1923876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptrh2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129837 GeneID:217057 MGI:2444848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidyl-tRNA hydrolase 2 transcript_id : NM_175004.2

name	Cltc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51491844 GeneID:67300 MGI:2388633
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : clathrin, heavy polypeptide (Hc) transcript_id : NM_001003908.1

name	Dhx40 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144926008 GeneID:67487 MGI:1914737
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAH (Asp-Glu-Ala-His) box polypeptide 40 transcript_id : NM_026191.2

name	Ypel2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115496192 GeneID:77864 MGI:1925114
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : yippee-like 2 (Drosophila) transcript_id : NM_001005341.3

name	Gdpd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956139 GeneID:66569 MGI:1913819
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycerophosphodiester phosphodiesterase domain containing 1 transcript_id : NM_025638.1

name	1200011M11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956215 GeneID:74133 MGI:1921383
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200011M11 gene transcript_id : NM_024262.1

name	Prr11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348894 GeneID:270906 MGI:2444496
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proline rich 11 transcript_id : NM_175563.4

name	1110001A07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803563 GeneID:66140 MGI:1913390
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110001A07 gene transcript_id : NM_025377.2

name	Trim37 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37574063 GeneID:68729 MGI:2153072
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif protein 37 transcript_id : NM_197987.1

name	Ppm1e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130345 GeneID:320472 MGI:2444096
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1E (PP2C domain containing) transcript_id : NM_177167.4

name	Rad51c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60593000 GeneID:114714 MGI:2150020
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rad51 homolog c (S. cerevisiae) transcript_id : NM_053269.2

name	Tex14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13878214 GeneID:83560 MGI:1933227
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis expressed gene 14 transcript_id : NM_031386.1

name	Sept4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755119 GeneID:18952 MGI:1270156
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : septin 4 transcript_id : NM_011129.1

name	Mtmr4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18875367 GeneID:170749 MGI:2180699
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myotubularin related protein 4 transcript_id : NM_133215.1

name	Hsf5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865886 GeneID:327992 MGI:2685585
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock transcription factor family member 5 transcript_id : NM_001045527.1

name	Rnf43 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802131 GeneID:207742 MGI:2442609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 43 transcript_id : NM_172448.2

name	Supt4h1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678180 GeneID:20922 MGI:107416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : suppressor of Ty 4 homolog 1 (S. cerevisiae) transcript_id : NM_009296.1

name	Bzrap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27369600 GeneID:207777 MGI:2450877
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : benzodiazapine receptor associated protein 1 transcript_id : NM_172449.1

name	Mpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754731 GeneID:17523 MGI:97137
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myeloperoxidase transcript_id : NM_010824.1

name	Lpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17975592 GeneID:76113 MGI:1923363
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lactoperoxidase transcript_id : NM_080420.1

name	Mks1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89199234 GeneID:380718 MGI:3584243
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Meckel syndrome, type 1 transcript_id : NM_001039684.1

name	Epx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679674 GeneID:13861 MGI:107569
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eosinophil peroxidase transcript_id : NM_007946.1

name	Olfr462 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239009 GeneID:258406 MGI:3030296
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 462 transcript_id : NM_146411.1

name	Olfr463 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239013 GeneID:258408 MGI:3030297
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 463 transcript_id : NM_146413.1

name	Olfr464 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239007 GeneID:258407 MGI:3030298
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 464 transcript_id : NM_146412.1

name	Dynll2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802589 GeneID:68097 MGI:1915347
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein light chain LC8-type 2 transcript_id : NM_026556.3

name	Sfrs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118582270 GeneID:110809 MGI:98283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 1 (ASF/SF2) transcript_id : NM_001078167.1

name	Sfrs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91598842 GeneID:110809 MGI:98283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 1 (ASF/SF2) transcript_id : NM_173374.3

name	Vezf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117414175 GeneID:22344 MGI:1313291
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vascular endothelial zinc finger 1 transcript_id : NM_016686.3

name	Cuedc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37574103 GeneID:103841 MGI:2144281
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CUE domain containing 1 transcript_id : NM_198013.1

name	Mrps23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130310 GeneID:64656 MGI:1928138
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein S23 transcript_id : NM_024174.5

name	1700106J16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390265 GeneID:74297 MGI:1921547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs product : RIKEN cDNA 1700106J16 gene transcript_id : XM_484061.3

name	Msi2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286824 GeneID:76626 MGI:1923876
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Musashi homolog 2 (Drosophila) transcript_id : NM_054043.3

name	Ptrh2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239415 GeneID:217057 MGI:2444848
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : Bcl-2 inhibitor of transcription protein_id : NP_778169.1

name	Cltc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51491845 CCDS:CCDS25204.1 GeneID:67300 MGI:2388633
definition	GO_component : GO:0030132 - clathrin coat of coated pit [Evidence IEA]; GO:0030125 - clathrin vesicle coat [Evidence IEA]; GO:0005905 - coated pit [Evidence IEA]; GO:0030117 - membrane coat [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : clathrin, heavy polypeptide (Hc) protein_id : NP_001003908.1

name	Dhx40 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144926009 GeneID:67487 MGI:1914737
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA] codon_start : 1 product : DEAH (Asp-Glu-Ala-His) box polypeptide 40 protein_id : NP_080467.3

name	Ypel2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52693929 CCDS:CCDS25205.1 GeneID:77864 MGI:1925114
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : ortholog of human yippee-like 2 (Drosophila) YPEL2 product : yippee-like 2 protein_id : NP_001005341.1

name	Gdpd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956140 CCDS:CCDS25206.1 GeneID:66569 MGI:1913819
definition	codon_start : 1 product : glycerophosphodiester phosphodiesterase domain containing 1 protein_id : NP_079914.1

name	1200011M11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956216 CCDS:CCDS25207.1 GeneID:74133 MGI:1921383
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 product : hypothetical protein LOC74133 protein_id : NP_077224.1

name	Prr11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425358 CCDS:CCDS25208.1 GeneID:270906 MGI:2444496
definition	codon_start : 1 product : proline rich 11 protein_id : NP_780772.1

name	1110001A07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384752 CCDS:CCDS25209.1 GeneID:66140 MGI:1913390
definition	codon_start : 1 product : hypothetical protein LOC66140 protein_id : NP_079653.1

name	Trim37 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574064 CCDS:CCDS25210.1 GeneID:68729 MGI:2153072
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : tripartite motif protein 37 protein_id : NP_932104.1

name	Ppm1e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54873617 CCDS:CCDS25211.1 GeneID:320472 MGI:2444096
definition	codon_start : 1 product : protein phosphatase 1E (PP2C domain containing) protein_id : NP_796141.2

name	Rad51c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716605 CCDS:CCDS25212.1 GeneID:114714 MGI:2150020
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : Rad51 homolog c protein_id : NP_444499.1

name	Tex14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13878215 GeneID:83560 MGI:1933227
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : from 5'-RACE analysis product : testis expressed gene 14 protein_id : NP_113563.1

name	Sept4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755120 CCDS:CCDS25213.1 GeneID:18952 MGI:1270156
definition	GO_component : GO:0009434 - flagellum (sensu Eukaryota) [Evidence IMP] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0048240 - sperm capacitation [Evidence IMP]; GO:0030382 - sperm mitochondrion organization and biogenesis [Evidence IMP]; GO:0007286 - spermatid development [Evidence IMP] codon_start : 1 note : peanut-like 2 homolog; M-Septin; septin H5; cell division control-related protein 2b product : septin 4 protein_id : NP_035259.1

name	Mtmr4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875368 CCDS:CCDS25214.1 GeneID:170749 MGI:2180699
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004437 - inositol or phosphatidylinositol phosphatase activity [Evidence IEA] GO_process : GO:0046839 - phospholipid dephosphorylation [Evidence IEA] codon_start : 1 note : FYVE zinc finger phosphatase product : myotubularin related protein 4 protein_id : NP_573478.1

name	Hsf5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865887 GeneID:327992 MGI:2685585
definition	codon_start : 1 product : heat shock transcription factor family member 5 protein_id : NP_001038992.1

name	Rnf43 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369607 CCDS:CCDS25215.1 GeneID:207742 MGI:2442609
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : ring finger protein 43 protein_id : NP_766036.1

name	Supt4h1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678181 GeneID:20922 MGI:107416
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008159 - positive transcription elongation factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045941 - positive regulation of transcription [Evidence IEA] codon_start : 1 product : suppressor of Ty 4 homolog 1 protein_id : NP_033322.1

name	Bzrap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369601 GeneID:207777 MGI:2450877
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : peripheral-type benzodiazepine receptor-associated protein 1 product : benzodiazapine receptor associated protein 1 protein_id : NP_766037.1

name	Mpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754732 CCDS:CCDS25217.1 GeneID:17523 MGI:97137
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IDA] GO_process : GO:0042744 - hydrogen peroxide catabolism [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA] codon_start : 1 exception : mismatches in translation product : myeloperoxidase protein_id : NP_034954.1

name	Lpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17975593 CCDS:CCDS25218.1 GeneID:76113 MGI:1923363
definition	GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : lactoperoxidase protein_id : NP_536345.1

name	Mks1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89199235 GeneID:380718 MGI:3584243
definition	codon_start : 1 exception : mismatches in translation note : FABB proteome-like product : Meckel syndrome, type 1 protein_id : NP_001034773.1

name	Epx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679675 CCDS:CCDS25220.1 GeneID:13861 MGI:107569
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA] GO_process : GO:0042744 - hydrogen peroxide catabolism [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA] codon_start : 1 exception : mismatches in translation product : eosinophil peroxidase protein_id : NP_031972.1

name	Olfr462 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239010 CCDS:CCDS25221.1 GeneID:258406 MGI:3030296
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2PAEV-9536824-9535889; olfactory receptor MOR240-3 product : olfactory receptor 462 protein_id : NP_666523.1

name	Olfr463 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239014 CCDS:CCDS25222.1 GeneID:258408 MGI:3030297
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2PAEV-9540823-9539888; olfactory receptor MOR240-1 product : olfactory receptor 463 protein_id : NP_666525.1

name	Olfr464 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239008 CCDS:CCDS25223.1 GeneID:258407 MGI:3030298
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2PAEV-9555122-9554181; olfactory receptor MOR240-2 product : olfactory receptor 464 protein_id : NP_666524.1

name	Dynll2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18087731 GeneID:68097 MGI:1915347
definition	GO_component : GO:0030286 - dynein complex [Evidence NAS] [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA]; GO:0016459 - myosin [Evidence IDA] GO_function : GO:0003774 - motor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0046907 - intracellular transport [Evidence NAS] codon_start : 1 product : dynein light chain 2 protein_id : NP_080832.1

name	Sfrs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328400 GeneID:110809 MGI:98283
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006376 - mRNA splice site selection [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : splicing factor, arginine/serine-rich 1 isoform 1 protein_id : NP_775550.2

name	Sfrs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118582271 GeneID:110809 MGI:98283
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006376 - mRNA splice site selection [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : splicing factor, arginine/serine-rich 1 isoform 2 protein_id : NP_001071635.1

name	Vezf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117414176 GeneID:22344 MGI:1313291
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0001885 - endothelial cell development [Evidence IMP] codon_start : 1 product : vascular endothelial zinc finger 1 protein_id : NP_057895.2

name	Cuedc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574104 CCDS:CCDS25226.1 GeneID:103841 MGI:2144281
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : CUE domain containing 1 protein_id : NP_932130.1

name	Mrps23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27228982 CCDS:CCDS25227.1 GeneID:64656 MGI:1928138
definition	GO_component : GO:0005763 - mitochondrial small ribosomal subunit [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence ISS] codon_start : 1 product : mitochondrial ribosomal protein S23 protein_id : NP_077136.2

name	1700106J16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51828639 GeneID:74297 MGI:1921547
definition	codon_start : 1 product : hypothetical protein LOC74297 protein_id : XP_484061.1

name	Msi2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17157989 GeneID:76626 MGI:1923876
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005844 - polysome [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008266 - poly(U) binding [Evidence IDA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003727 - single-stranded RNA binding [Evidence IDA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : unclassified translation discrepancy note : Musashi2 product : Musashi homolog 2 protein_id : NP_473384.1

name	LOC668793 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668793
definition	number : 1 pseudo : _no_value

name	LOC668816 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262020 GeneID:668816
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 8 Proteins product : similar to ribosomal protein L21 pseudo : _no_value transcript_id : XR_034962.1

clone name	MSMg01-480P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272P03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-139F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381A11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-348A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530M18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-390E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108J18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-477E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373A07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-261M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339I04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-307D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242J24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-493K12.T7 (MSMg01no493_k12.b1)	MSMg01-493K12.TJ (MSMg01no493_k12.g1)
ACC	AG571122	AG571123
length	1,377	737
length of high quality (start - end)	---	514 (76 - 589)
definition	CHROMAT_FILE: MSMg01no493_k12.b1 PHD_FILE: MSMg01no493_k12.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:18:17 2005	CHROMAT_FILE: MSMg01no493_k12.g1 PHD_FILE: MSMg01no493_k12.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:18:17 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	ACCACGTCCCGCGCGGGCGNNNTTTGGTTATGTAGAAATAGATCGACATC GCGAGAGAAGGAGTGTGCGGCACAGGACTGCATGTCCCGCGTCCCATGCG GCGTCAGCAGAAGCATCCAAGGCATAAGGTCGCGTAACACGCTGATAATA TCTCTTACACCTAACCTATACATGTCTCTTACGTATGATGATTGGCTCCG CGCAGATAATATATTTCCATATTTGTATCGCCTCTAACCCACACAACATC ACTAAGAACACCACACTAAATAAGTATGTGCGCGGCTTATCGATGCAGTA TGAACTTAGCTAATGAGACTGTTTACGTACAGCCGCTGGATAGTAACATG TTGGGGATCAGCGATTAGTGGCACCGGCATGGCCGAGGGCACGGCTGTTC AATTACGTGATGTGATCATAGACGATATTGTCTCCGTTATTCTCTACACG CGCTCGTTATCGATATATGACAGCCGGCGGGACGACATCAGGCGACGCGG AGAGTAGTATGAATTGACTCCTTAATTCGCCCCCCACTACTAATATAATA TACCAAAACCACACATCACGCCGAGATAATGTATATGAGTGTAATGACAC GAGTATGAATAGACATGACGCCGTATAGAACATCGGATATTACGACTACC TAGTTGCGTACTCGTAATCTCATTACTAATCCGTTATTGGATTGCGCACG GAGTGTATGTGATATGCACATGTGCGATATATATACGTTAAGATATATAT TAGACTCATACTCCTCCTAACGTGCTATAACATTCTTCCTACGAGGCAGA ATATCCTTATGCTCGCAAGAATGTGAGCACTGGCGGGGTCTAGATAGTAA GTGGCCTCAATATGAGNTCNGCGACCACTCTATAGAGTAGTCTATTATAC GCACCCGGCGATGANATCATGACGCTAGATATACGAGTATTATAGAAATT AGCGTCGAGAAACGTGCGACGGGCCAAAGACACCGTGCAGATATACGCTG GTCGAGGACGAGTAATATGATAGCGGCTCATGCATGCGCAGGGAAGCATG AATTGTAGAGGCGGAGCTGCGCAGTGAGTATATCAAGGAGGAAATGCTCG ACAAAACGTCAGTGTGAAGGACTTAAGACAGAGACGCACGCACGCGTGCG AGGCTNTGTCTGTCTCTGATGCCACGCCTATGGTGTAGCTANACACGTTA TGTAATAGACGTATCTAGTGAAACACAATATTATATGTATGTAGAATTAT GCCGACGAATGAGATGAACAGATGGGTTGTGAGAACTACATAGANAGAGN GACAACTGCGAAGATCACGCATCTCATATATATGACACACGACGCGAGTT GAGATGAAGATCGTGTGCACAGAGGAN	AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXACCATGTAGGCCCAAACCATCTCAA ACTCTTAGAAATTCTCCTGCCTCTGCCTCCCTACTGCTGGAATTAAAGGC TTTTGCTACCGTGCCCAGCCCAATTTCATTTTTTGAGGCAGAGTCTTGTG TATCCCAGGCTACCCTGTAGCTTATTATGTAGCTGATCTTGAACTCCTGT TTCTCCTGTACCTGCCTCCTGCGTGCTGGGGTCACCGGCCACACGGGCGT GAGACAGATGTGCTCAGTTTCCCCAAAGCTTCCAGCAAATAAGTACCAGT ACTGGAGCCAAAAGAACTCAGGTTCTACAGGATCCTGAAGCTGAGGATGG ATGTGGTGTGGCTGTGACTGATGAGAAAATGTCTGGAATTGTCATCCTAC TCAACTTTACACTGAAGCATCTATGACTCTACCAGGAGAATGTGTATCTG AAAACAATAAGAAAGGTTATCTTGAACATAAATACACATGTATTTACATT GTATTTGTAGAGAGAATGAAGAATGCCCCACTTTGGTGTTTTGAGACAGG GCTTAACTCTTAGCCCAAGCTTGGCCTGGAATTGATGAAGCCCAGGCTGA ACCCCAACTGTTTGGGATCCTCCTTCCCTCCCTCAGTTTCCAAATGCTGG GAATGTGCTGGGAAGACCATGCCCCGCTTATATAAGG
quality values	Open. Hide. 8 8 6 6 7 9 9 9 9 8 8 8 8 6 6 6 6 6 3 0 0 0 3 7 6 8 6 6 8 8 10 15 12 10 10 10 8 8 8 8 6 6 8 8 10 10 13 10 8 8 8 8 8 6 6 6 7 8 6 8 8 10 8 10 9 8 8 6 6 8 6 6 8 6 6 8 6 8 8 8 8 8 9 8 8 8 8 8 8 10 12 10 10 10 8 8 8 8 8 8 8 10 8 9 9 9 9 11 11 11 11 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 10 10 9 11 10 10 6 8 6 6 8 6 8 8 8 8 10 11 8 8 8 6 6 6 6 8 8 9 7 8 9 9 10 8 13 8 6 6 6 8 8 9 9 9 8 8 8 8 8 10 12 7 7 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 6 7 8 8 8 8 6 6 6 6 8 6 7 6 6 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 11 12 8 8 7 7 8 8 10 8 8 8 8 8 8 8 9 8 8 6 6 6 6 8 8 6 7 6 6 6 6 9 11 12 11 10 8 10 8 8 8 8 8 10 8 8 8 8 8 8 8 9 9 10 8 8 10 10 8 8 6 6 6 8 8 8 8 8 6 6 6 8 6 8 8 8 8 8 8 8 11 10 11 11 11 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 8 8 8 8 8 8 8 8 7 7 9 12 10 10 9 9 9 9 9 10 10 11 10 11 13 10 10 12 10 10 9 9 9 9 9 9 8 6 6 6 6 6 8 6 9 10 11 9 7 6 6 7 8 8 8 8 8 8 8 10 10 10 11 12 11 8 8 6 6 8 6 8 8 8 8 8 8 8 8 8 7 9 9 9 9 7 7 6 8 6 6 6 6 8 8 8 6 6 6 6 8 9 8 8 8 8 10 8 9 9 10 8 8 8 8 8 8 8 8 8 6 7 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 6 6 6 6 8 6 7 7 6 8 8 8 13 11 9 8 8 8 8 8 10 10 12 8 8 8 8 8 8 8 8 8 8 12 12 10 10 10 10 10 10 10 11 11 8 8 8 8 6 6 8 8 9 6 8 6 6 6 6 11 13 10 10 6 6 6 6 10 10 12 9 9 12 11 15 8 8 6 6 8 8 12 12 8 8 8 8 8 8 8 8 8 10 10 10 11 8 8 6 6 6 6 6 10 10 13 8 8 8 8 8 8 13 11 8 8 9 9 12 10 10 10 6 6 8 6 8 9 9 9 9 8 10 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 9 6 8 8 10 10 10 9 9 10 9 7 8 6 6 6 6 9 10 10 10 10 9 9 9 8 6 6 8 8 8 10 10 10 8 8 8 8 8 8 8 10 10 9 15 10 8 8 8 6 6 8 10 10 9 9 6 6 6 6 8 8 6 6 6 6 9 8 8 6 6 8 6 6 6 6 8 8 12 11 10 8 8 8 8 8 10 15 15 15 10 10 8 8 8 8 8 8 9 9 9 9 10 10 9 8 8 8 8 8 8 13 13 13 12 11 8 8 8 8 9 9 8 11 10 10 10 10 10 8 8 8 8 8 8 8 8 8 10 8 8 6 6 8 8 8 6 6 8 12 6 6 8 6 8 8 8 12 8 8 8 8 10 10 14 10 10 10 10 10 10 10 12 9 9 10 8 8 8 8 8 10 8 8 8 8 9 9 10 9 9 8 8 6 6 6 7 7 7 6 8 10 8 8 10 10 8 8 9 9 10 13 10 10 10 10 9 9 6 6 6 7 8 8 10 10 8 8 8 8 8 8 10 8 8 6 6 6 6 6 6 6 6 8 8 3 0 3 3 0 3 8 8 8 8 8 8 10 10 10 10 9 8 8 8 8 8 10 10 10 10 10 10 9 9 8 8 8 8 8 8 8 6 6 6 6 8 8 8 10 10 8 8 3 0 3 6 6 6 6 6 6 6 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 7 6 6 9 10 10 10 10 9 8 8 6 6 8 8 8 8 8 8 6 6 8 8 8 8 10 8 8 8 8 8 8 8 8 6 6 8 6 6 8 8 8 8 10 10 9 7 11 6 6 6 8 8 8 6 6 6 6 6 6 6 8 8 8 8 8 10 10 10 8 13 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 10 8 6 6 8 8 10 10 10 8 7 7 6 8 8 8 8 11 9 8 8 8 8 8 8 8 8 9 9 8 8 8 6 6 6 6 8 8 8 8 8 8 8 9 9 9 9 9 10 10 10 10 10 10 10 10 8 8 8 8 10 8 10 10 8 8 6 6 8 6 6 6 6 6 6 7 8 8 8 8 8 7 6 6 6 6 6 8 8 11 8 10 8 8 11 10 8 8 10 10 10 9 9 9 13 10 16 12 6 6 6 6 3 0 3 8 8 8 11 11 11 9 9 10 9 9 9 8 8 8 7 6 6 6 8 10 8 8 7 6 8 8 8 8 8 10 10 10 3 0 3 8 6 8 8 10 15 15 6 6 6 8 8 8 8 8 8 8 8 8 7 6 7 6 6 6 7 7 7 10 8 8 8 8 8 6 6 6 6 12 12 14 12 11 7 7 6 8 10 6 6 6 6 8 8 10 7 6 6 6 6 7 8 8 8 8 8 8 8 8 8 6 6 6 6 10 6 6 8 8 11 8 8 8 8 8 8 10 10 8 8 8 8 8 6 6 6 6 6 6 6 3 0 3 8 8 3 0 3 9 13 11 6 8 6 6 6 6 9 9 9 9 6 6 6 6 8 8 10 10 10 9 9 9 10 11 11 8 8 8 8 8 10 12 9 8 7 6 8 8 10 10 8 8 8 8 6 6 6 8 8 8 8 8 8 8 15 12 10 6 6 6 6 6 6 11 11 16 8 8 6 6 8 3 0	Open. Hide. 9 9 8 8 11 9 9 18 13 25 32 37 35 31 31 35 33 30 34 30 37 37 39 37 37 44 31 25 20 9 9 9 12 12 12 9 13 9 15 15 29 23 37 30 30 59 39 50 50 50 36 36 33 48 41 41 41 33 15 8 8 8 8 8 8 10 11 11 23 19 20 22 24 31 31 33 33 36 47 47 53 57 57 57 59 47 47 50 50 50 50 57 50 50 50 42 42 40 40 40 42 54 68 68 54 57 57 57 54 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 57 57 54 54 57 59 59 59 57 57 68 68 68 68 68 59 59 59 57 54 54 52 57 52 59 59 59 57 68 68 68 68 68 68 57 57 57 59 57 59 59 59 57 57 57 57 59 59 59 59 57 57 59 59 59 68 68 68 68 68 68 57 59 59 59 52 59 57 59 59 59 59 59 57 57 57 59 59 57 57 68 68 68 68 68 57 57 57 57 52 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 62 62 52 52 62 62 62 52 52 52 52 52 62 62 52 62 47 47 35 43 43 43 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 62 52 52 52 62 62 62 62 62 62 62 62 62 41 38 32 30 35 35 27 27 27 31 43 44 59 57 57 57 57 57 57 59 57 68 68 68 68 57 44 44 43 43 35 43 43 52 57 59 59 59 57 52 52 43 43 43 43 35 33 33 43 44 44 43 33 44 44 59 59 59 57 57 52 52 52 52 57 52 54 54 52 50 50 43 52 52 57 57 57 57 57 57 43 57 52 52 52 57 57 57 57 57 57 57 57 57 57 50 43 43 36 43 32 37 37 42 32 42 35 35 41 44 43 47 47 47 47 47 47 59 57 68 68 57 57 57 57 57 57 46 57 57 57 54 48 48 47 47 47 50 59 59 48 46 41 39 37 42 42 42 36 36 39 47 41 59 43 43 43 43 43 48 48 48 48 48 40 37 30 29 37 30 32 28 37 37 37 37 28 28 28 36 36 41 37 32 27 22 28 28 28 34 26 29 19 19 19 29 27 26 27 32 24 29 23 28 30 34 34 43 48 48 57 48 48 48 48 37 37 35 33 32 28 28 33 32 32 26 31 31 28 15 22 15 18 23 19 37 37 37 37 28 22 22 14 14 21 28 30 37 37 30 24 27 18 25 17 28 32 41 39 34 33 28 28 25 32 37 32 28 13 13 8 8 8 15 21 19 14 15 19 24 18 12 12 11 10 10 19 18 22 21 19 14 11 9 9 9 10 11 14 9 9 9 10 10 23 18 17 16 13 19 13 14 15 17 17 19 19 19 22 8 8 8 8 8 9 15 10 10 10 12 8 9 8 10 10 10 19 17 22 24 23 16 15 11 11 16 11 10 13 17 13 17 13 11 11 8 9 11 11 15 18 30 11 13 11 12 8 8 10 10 19 10 18 18 14 14 16 15 10 12 15 21 19 21 12 13 13 12 23 18 22 24 24 22 21 11 10 10 15 16 21 19 19 10 9 9 8 8 8 8 8 8 8 9 9 10 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no493_k12.g1 MSMg01no493_k12.g1 CHROMAT_FILE:
MSMg01no493_k12.g1 PHD_FILE: MSMg01no493_k12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:17 2005
         (514 letters)



>mm_chr11_87498185_87499097
          Length = 913

 Score =  978 bits (506), Expect = 0.0
 Identities = 512/514 (99%), Gaps = 1/514 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   accatgtaggcccaaaccatctcaaactcttagaaattctcctgcctctgcctccctact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accatgtaggcccaaaccatctcaaactcttagaaattctcctgcctctgcctccctact 260

                                                                       
Query: 61  gctggaattaaaggcttttgctaccgtgcccagcccaatttcattttttgaggcagagtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctggaattaaaggcttttgctaccgtgcccagcccaatttcattttttgaggcagagtc 320

                                                                       
Query: 121 ttgtgtatcccaggctaccctgtagcttattatgtagctgatcttgaactcctgtttctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtgtatcccaggctaccctgtagcttattatgtagctgatcttgaactcctgtttctc 380

                                                                       
Query: 181 ctgtacctgcctcctgcgtgctggggtcaccggccacacgggcgtgagacagatgtgctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtacctgcctcctgcgtgctggggtcaccggccacacgggcgtgagacagatgtgctc 440

                                                                       
Query: 241 agtttccccaaagcttccagcaaataagtaccagtactggagccaaaagaactcaggttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtttccccaaagcttccagcaaataagtaccagtactggagccaaaagaactcaggttc 500

                                                                       
Query: 301 tacaggatcctgaagctgaggatggatgtggtgtggctgtgactgatgagaaaatgtctg 360
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 tacaggatcctgaagctgaggatggatgtggtgtggctgtgactgatgggaaaatgtctg 560

                                                                       
Query: 361 gaattgtcatcctactcaactttacactgaagcatctatgactctaccaggagaatgtgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaattgtcatcctactcaactttacactgaagcatctatgactctaccaggagaatgtgt 620

                                                                       
Query: 421 atctgaaaacaataagaaaggttatcttgaacataaatacacatgtatttacattgtatt 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 atctgaaaacaataagaaaggttatcttgaacataaatacacatgtatttacat-gtatt 679

                                             
Query: 481 tgtagagagaatgaagaatgccccactttggtgt 514
           ||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtagagagaatgaagaatgccccactttggtgt 713


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 913
Length adjustment: 10
Effective length of query: 504
Effective length of database: 903
Effective search space:   455112
Effective search space used:   455112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information