Query= MSMg01no495_n01.b1 MSMg01no495_n01.b1 CHROMAT_FILE:
MSMg01no495_n01.b1 PHD_FILE: MSMg01no495_n01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:57 2005
(656 letters)
>mm_chr11_68368200_68369255
Length = 1056
Score = 1201 bits (621), Expect = 0.0
Identities = 648/665 (97%), Gaps = 13/665 (1%)
Strand = Plus / Minus
Query: 5 gaattcagtggtttccaggtcatgagaaatggctccagatttttttctctccccagaggc 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 gaattcagtggcatccaggtcatgagaaatggctccagatttttttctctccccagaggc 702
Query: 65 atttcctctctcaactgaactaagattcgagcccttgaaatcatggggggg--------- 115
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 atttcctctctcaactgaactaagattcgagcccttgaaatcatgggggggggggggggg 642
Query: 116 ----ggtgtaccataggctttcctccagaatggccaactatccagctacagatgcgggaa 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aggaggtgtaccataggctttcctccagaatggccaactatccagctacagatgcgggaa 582
Query: 172 ttatttgttctcagacctagggtctccatctctaccactgagctgtatcccagctctgat 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ttatttgttctcagacctagggtctccatctctaccactgagctgtatcccagctctgat 522
Query: 232 ttggtccattcatttttcattcaaggcttgctcaatgcacctaatttggctgtggattgg 291
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 521 ttggtccattcatttttcattcaaggcttgctcaatgcacctaatttggccgtggattgg 462
Query: 292 agagtggggggtgtttgccagccaatatgtatgtgtagctaaatttgaaatggtaatttc 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 agagtggggggtgtttgccagccaatatgtatgtgtagctaaatttgaaatggtaatttc 402
Query: 352 tcaggagacgggtagacagctaaggtcctccgcactttctcttaccatatggctgacaga 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tcaggagacgggtagacagctaaggtcctccgcactttctcttaccatatggctgacaga 342
Query: 412 ctctcactgatacttagaacctaaggattaaaacattattaaattaaaatttaaaaacta 471
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 341 ctctcactgatacttagaacctaaggattaaaacgttattaaattaaaatttaaaaacta 282
Query: 472 agagttgctagctgggtatggtgacgcatgcctgagtctaacacttgagggatggaggca 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 agagttgctagctgggtatggtgacgcatgcctgagtctaacacttgagggatggaggca 222
Query: 532 gggggatcaggagttcatcatcagcctcagctagcttttttgaggtgagaccttgtttac 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gggggatcaggagttcatcatcagcctcagctagcttttttgaggtgagaccttgtttac 162
Query: 592 aaaactgagcaaaaagaaaacaaacatgcaagtgattaatgggtgtggaggcttaatccc 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aaaactgagcaaaaagaaaacaaacatgcaagtgattaatgggtgtggaggcttaatccc 102
Query: 652 acatc 656
|||||
Sbjct: 101 acatc 97
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_n01.g1 MSMg01no495_n01.g1 CHROMAT_FILE:
MSMg01no495_n01.g1 PHD_FILE: MSMg01no495_n01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:57 2005
(241 letters)
>mm_chr11_68222183_68222823
Length = 641
Score = 441 bits (228), Expect = e-128
Identities = 237/240 (98%)
Strand = Plus / Plus
Query: 1 gccagcgaagatcagggagagtgaaagttggagctcaccaccactccttgccttagtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gccagcgaagatcagggagagtgaaagttggagctcaccaccactccttgccttagtctg 260
Query: 61 aagttctgttgtctgtggttctccacatcctgctggctatgagcaggacagtggtgggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagttctgttgtctgtggttctccacatcctgctggctatgagcaggacagtggtgggac 320
Query: 121 tcctcccagtgctaatgaaggttgacatcaggactattggggctcctcactgattatcta 180
||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||
Sbjct: 321 tcctcccagtgctaatgaaggttgacatcaggactatcggggctcctcactgatcaccta 380
Query: 181 gttagcacgggggaggctgggggtggctgagtctactctacaaaggtgaaaggcttccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttagcacgggggaggctgggggtggctgagtctactctacaaaggtgaaaggcttccag 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
