Query= MSMg01no495_o06.b1 MSMg01no495_o06.b1 CHROMAT_FILE:
MSMg01no495_o06.b1 PHD_FILE: MSMg01no495_o06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:03 2005
(132 letters)
>mm_chr11_46606266_46606797
Length = 532
Score = 226 bits (117), Expect = 3e-64
Identities = 129/133 (96%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 1 tcattctttgacaccatcatataggcaagacctacagattgtgttggggtgtctttttta 60
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 201 tcattctttgacaccatcatataggcaggacctacagattgtgttggggtgtctttttaa 260
Query: 61 aaaagtttcttctt-ttctataacaatgacacccccatttttccgtgccactagcttgtt 119
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaagtttcttcttatt-tataacaatgacacccccatttttccgtgccactagcttgtt 319
Query: 120 gaagaaaccagat 132
|||||||||||||
Sbjct: 320 gaagaaaccagat 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 132
Length of database: 532
Length adjustment: 8
Effective length of query: 124
Effective length of database: 524
Effective search space: 64976
Effective search space used: 64976
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no495_o06.g1 MSMg01no495_o06.g1 CHROMAT_FILE:
MSMg01no495_o06.g1 PHD_FILE: MSMg01no495_o06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:03 2005
(280 letters)
>mm_chr11_46794158_46794837
Length = 680
Score = 514 bits (266), Expect = e-150
Identities = 275/278 (98%)
Strand = Plus / Minus
Query: 2 gaataccttcctcacaacctttgtaaaacgtggagaaactaaagcctagaactgtcacac 61
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 479 gaatacctccctcacaaccttggtaaaacgtggagaaactaaagcctagaactgttacac 420
Query: 62 tctgatacagacatgtatgtctgtaaagcaaatctagataaatttgatgaagtactgtga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tctgatacagacatgtatgtctgtaaagcaaatctagataaatttgatgaagtactgtga 360
Query: 122 ctgcttcactgccccgaacttcagcttcttaaaattcctaagcagggaagaggatcttta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctgcttcactgccccgaacttcagcttcttaaaattcctaagcagggaagaggatcttta 300
Query: 182 atctgtggcttgtatttcaggttggagtccccaacccgatctctagtgatggaagcccca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 atctgtggcttgtatttcaggttggagtccccaacccgatctctagtgatggaagcccca 240
Query: 242 aaaggagtagaaataaatgcagaagctggcaatatgga 279
||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aaaggagtagaaataaatgcagaagctggcaatatgga 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
