Query= MSMg01no497_b21.b1 MSMg01no497_b21.b1 CHROMAT_FILE:
MSMg01no497_b21.b1 PHD_FILE: MSMg01no497_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:41 2005
(573 letters)
>mm_chr11_8132638_8133610
Length = 973
Score = 1100 bits (569), Expect = 0.0
Identities = 572/573 (99%)
Strand = Plus / Minus
Query: 1 catatttcttccagggcaggctctatgatatatcagcatctgtgttttctgagatctgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 catatttcttccagggcaggctctatgatatatcagcatctgtgttttctgagatctgca 714
Query: 61 tgagagcagagggacaaagtatacatcttggccttccctatcatagtgatgctcaatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tgagagcagagggacaaagtatacatcttggccttccctatcatagtgatgctcaatgca 654
Query: 121 gtctgagaatgtatcccaggcctgagctggggcacggtggccagtgtggtagttaattca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gtctgagaatgtatcccaggcctgagctggggcacggtggccagtgtggtagttaattca 594
Query: 181 cttctgatatgaaacaacataacatctttcttcactggagtgtgttgagaaataaaacag 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 593 cttctgatatgaaacaacataacgtctttcttcactggagtgtgttgagaaataaaacag 534
Query: 241 tgtggcgaatctcataatccctttgattacagctcactttaaaatcaagtttaattaccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tgtggcgaatctcataatccctttgattacagctcactttaaaatcaagtttaattaccg 474
Query: 301 gggatatgggctgttttgctgagtgtcttccggttcatagaggagtgctaggacacagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gggatatgggctgttttgctgagtgtcttccggttcatagaggagtgctaggacacagat 414
Query: 361 ggtagcaggaggtgtgcagagacagatggaatgaactagcgtgagcaattcctgcacaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ggtagcaggaggtgtgcagagacagatggaatgaactagcgtgagcaattcctgcacaca 354
Query: 421 ttaaatccttcccatctttgctagaggattaagtagctctaagtaggcagttaaactcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ttaaatccttcccatctttgctagaggattaagtagctctaagtaggcagttaaactcga 294
Query: 481 tactataaacatatgttagagatttgaagtcaacctcaataactcaaccaaagccccaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tactataaacatatgttagagatttgaagtcaacctcaataactcaaccaaagccccaga 234
Query: 541 aaaacagacctgagggactgaaaagaaaagaat 573
|||||||||||||||||||||||||||||||||
Sbjct: 233 aaaacagacctgagggactgaaaagaaaagaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_b21.g1 MSMg01no497_b21.g1 CHROMAT_FILE:
MSMg01no497_b21.g1 PHD_FILE: MSMg01no497_b21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:41 2005
(608 letters)
>mm_chr11_8001357_8002364
Length = 1008
Score = 1052 bits (544), Expect = 0.0
Identities = 591/610 (96%), Gaps = 8/610 (1%)
Strand = Plus / Plus
Query: 1 acagttgtcacttctctttgcttgtcatctcccttctccttgactgtgttccctcctttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 acagttgtcacttctctttgcttgtcatctcccttctccttgactgtgttccctcctttt 256
Query: 61 gacggaggattaatgccccacgttgtgatgagcacatgaaataaagtatggaaagctgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gacggaggattaatgccccacgttgtgatgagcacatgaaataaagtatggaaagctgtg 316
Query: 121 ggctgtgcagataaagacatcatccttcttacttgaaat---attttttttttt---att 174
|||||||| |||||||||||||||||||||||||||||| | ||||||||| |||
Sbjct: 317 ggctgtgctgataaagacatcatccttcttacttgaaatacaa--tttttttttaaaatt 374
Query: 175 ttgacagactccactaatgaaatagctgaggggaaaaaagctaccatgattgtttggtga 234
|||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 375 ttgatggacttctctaatgaaatagctgagggtaaaaaagctaccatgattgtttggtga 434
Query: 235 aggaaaattaccaagcacttccttttcccatgtctgaatttcgagttttaggttttagtc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aggaaaattaccaagcacttccttttcccatgtctgaatttcgagttttaggttttagtc 494
Query: 295 tgattccttgggaattcatccctgaaggaaaccaaaattaaatgtaggcatgaaatgcag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tgattccttgggaattcatccctgaaggaaaccaaaattaaatgtaggcatgaaatgcag 554
Query: 355 caaactttctcatagtgaggtaaggaaggaaggtggagtttgggaaagcatttcctggaa 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 caaactttctcatagtgaggtaaggaaggaaggtggagtttgggaaagcatttcctggaa 614
Query: 415 acatttttaactgcaggaccaataaaaatgatcagttcaatggtaactgccctgcaaaga 474
|| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 615 acgtttttaagtgcaggaccaatgaaaatgatcagttcaatggtaactgccctgcaaaga 674
Query: 475 gaagagaccctgcaggctcacacagccctgtgttactaagcaaaatctttcattaacaca 534
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 675 gaagaggccctgcaggctcacacagccctgtgtaactaagcaaaatctttcattaacaca 734
Query: 535 aaagttctattaacattccctgcgaggttaatgcaatacacggcaactaaacaaagtaaa 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aaagttctattaacattccctgcgaggttaatgcaatacacggcaactaaacaaagtaaa 794
Query: 595 cgtagagtaa 604
||||||||||
Sbjct: 795 cgtagagtaa 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
