Query= MSMg01no497_h08.b1 MSMg01no497_h08.b1 CHROMAT_FILE:
MSMg01no497_h08.b1 PHD_FILE: MSMg01no497_h08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:09 2005
(239 letters)
>mm_chr11_101846327_101846965
Length = 639
Score = 455 bits (235), Expect = e-132
Identities = 238/239 (99%)
Strand = Plus / Minus
Query: 1 actcaaaagttacagattcgtagacacttcggatctcacaaaattatagctgttcaaact 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 439 actcaaaagttacagattcgtagacacttcgggtctcacaaaattatagctgttcaaact 380
Query: 61 gctttcctcccttttagtcgccagcacacaggctaaggttaaagtagtcccccagggtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gctttcctcccttttagtcgccagcacacaggctaaggttaaagtagtcccccagggtca 320
Query: 121 gatgccaaacctggcgacctataccttcagcctttaaaaagttcaatgctgattcacatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gatgccaaacctggcgacctataccttcagcctttaaaaagttcaatgctgattcacatc 260
Query: 181 aaacattaaaagaagtgttccagaatagggctctttcctgtaaccttgggtaaggatcc 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaacattaaaagaagtgttccagaatagggctctttcctgtaaccttgggtaaggatcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no497_h08.g1 MSMg01no497_h08.g1 CHROMAT_FILE:
MSMg01no497_h08.g1 PHD_FILE: MSMg01no497_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:09 2005
(652 letters)
>mm_chr11_101746199_101747251
Length = 1053
Score = 1193 bits (617), Expect = 0.0
Identities = 644/655 (98%), Gaps = 5/655 (0%)
Strand = Plus / Plus
Query: 1 tcactatgtatttcaaacatttacactgaatcttctgcctcagcttgccatgaacaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcactatgtatttcaaacatttacactgaatcttctgcctcagcttgccatgaacaggga 260
Query: 61 ttacaggcataagataaggatgtctttgaagcgcctctttcccatctccacttcttgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacaggcataagataaggatgtctttgaagcgcctctttcccatctccacttcttgttg 320
Query: 121 ctaggtcaccaggcatggtcactatcagctgctattgcttcagccttccatcggaataac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaggtcaccaggcatggtcactatcagctgctattgcttcagccttccatcggaataac 380
Query: 181 tgtgatagagtaaccctccactgtgtaggactgtggagggaggagtcactgctggcttcc 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgatagagtaaccctccattgtgtaggactgtggagggaggagtcactgctggcttcc 440
Query: 241 tttgttgttagcgaggagctacccaccccctgtcctgccctcagatcaagcaggaccaca 300
| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgtggttagtgaggagctacccaccccctgtcctgccctcagatcaagcaggaccaca 500
Query: 301 agggggacacccttggcccagagaaatgcaaacaggatgtttatgtgtggttgtcgttcc 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agggggacactcttggcccagagaaatgcaaacaggatgtttatgtgtggttgtcgttcc 560
Query: 361 caccaagagcttttacatcagcccagggaaaatcacttcagaagtagctgccagacttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caccaagagcttttacatcagcccagggaaaatcacttcagaagtagctgccagacttgg 620
Query: 421 cgggggtttcctaaagttagcagacagccttatcagggctactgagagggtcagacagac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgggggtttcctaaagttagcagacagccttatcagggctactgagagggtcagacagac 680
Query: 481 tgggcgg---aacatgcctctttggagtgctatatacctctgctccccgactctactcca 537
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 681 tgggcggcggaacatgcctctttggagtgctata--cctctgctccccgactctactcca 738
Query: 538 ccattttcctcactttctgacagaccaggcagaacacatgttctatgttcaaatagcatt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ccattttcctcactttctgacagaccaggcagaacacatgttctatgttcaaatagcatt 798
Query: 598 ttgcagcagataagttagtggaagagcagagcccaggactcaggtgtcctcaata 652
||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 799 ttgcagcagataagttagtggaagagcggagcccaggactcaggtgtcctcaata 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1053
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1043
Effective search space: 669606
Effective search space used: 669606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
