AAAATCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTATTCATTTTTCTAAATTGTTTTTTTAGAATTTAATGTTGAA
TTGATTAAAGCACAAACTTCAATTGTATTTACTTTTTCTTTTTCATCTTT
TTTTCATTCTTTTCTTTTAAAGCTCTACATATAGACAGAATTTTAGCATA
AGCCTGGGGAAATTCAGAAATCACATGCAAGGGGATTGTGCCTGGGGTTC
ACTTCCCTTTACAACCTTAAATTAAATATCTTCAAGTATTACAAGATATC
CACAAATTTAAAAAGCAGATATTTTATTTAATTAATCTTAATTTTTGACA
GATAAATCTTATAGCTGCTGAGTATCAGAAACTTAAAAATTAAACTTATA
AATATGCTAAACCTTAAGCATCTGTTTAGTATCAGAGATATAGCTAATGA
CTTCAACTTAAATATGTATCTAAATCAGGCAATTACTCATTTCAAATTAG
AATTCAAAATTCAGTCTCGAATTCTAAATGGCCAAATTATATGAAACATT
AATAAGAAAATAAAATATATAACTATGCATACATTTAATTTATTCTTGAA
GTCAGTGCTGTAGGACTACTGATGTCCTCATTGAGGAAGTTCCTTAGCCG
AGTTTAATAGGATATTTTCACATTAATTTTACTATATACACATGATATGT
GTGACATGATTTTAAGCCACCTGACTCTGTGATGTGTN

NAACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGGCGACTCTTGAAAGGGTATACAA
ATGCTAGAACTAGGAGAGAGCTGTGACTTTTGCTGCTGCTGTTGCTACTG
GTTGCTGCAGTTAAGGGTCTGTTGCAATTTGTCAAGTTGTCATGAGCAAA
GAGATGAGAAGATAGTCGATAACCTGACTGTGAATATCAAACTTAGCCCA
AGGAACTTCATGTCCCTAATCAGCAGGAAGTATCAATATTAATGTGCCCT
CGCCCCTCTAGCCTTCTTTACCTCCTACCTAGTGTTGGGAGGTGGATTGG
GAAGGTAGAATGGGGTTAGAGAAGGGTAATAGGAAAANNAAAANCANAAA
ATANNNAAAAGTTNANNTACANCTTCTTCAAGNGAAGAGACCTGACTTAT
TTTCCGAGGGGCAAGATTCTTGATACAAGTAACTGCTTTAACTTAGTTGG
AGGGTTCCCACCGCATAAATGGTTTGTCTTTACTAAGATGCTTGAGGGTT
AACCTCCTCTGTTATCGGCAAGACCATATATACATACCTCCAATGGTAAG
GACACCATCTTTAGGGATCATGTTCCTCCCTAAAGGCAACCTTCCTTTTT
CCCTTTCTTAGGTCAGAAAGCCTTTGTCAAATTTTGCCCGCTTTCTTGGT
GTAGTTTTATATTTGTTATGAACTCCATCCTTTCGATCTTTTCTTTAGGA
TACTTCTATAATTGTAA

Query= MSMg01no497_i21.b1 MSMg01no497_i21.b1 CHROMAT_FILE:
MSMg01no497_i21.b1 PHD_FILE: MSMg01no497_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:17 2005
         (657 letters)



>mm_chr11_92673770_92674826
          Length = 1057

 Score = 1125 bits (582), Expect = 0.0
 Identities = 585/586 (99%)
 Strand = Plus / Minus

                                                                        
Query: 72   ctttttttcattcttttcttttaaagctctacatatagacagaattttagcataagcctg 131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 ctttttttcattcttttcttttaaagctctacatatagacagaattttagcataagcctg 998

                                                                        
Query: 132  gggaaattcagaaatcacatgcaaggggattgtgcctggggttcacttccctttacaacc 191
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997  gggaaattcagaaatcacatgcaaggggattgtgcctggggttcacttccctttacaacc 938

                                                                        
Query: 192  ttaaattaaatatcttcaagtattacaagatatccacaaatttaaaaagcagatatttta 251
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937  ttaaattaaatatcttcaagtattacaagatatccacaaatttaaaaagcagatatttta 878

                                                                        
Query: 252  tttaattaatcttaatttttgacagataaatcttatagctgctgagtatcagaaacttaa 311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877  tttaattaatcttaatttttgacagataaatcttatagctgctgagtatcagaaacttaa 818

                                                                        
Query: 312  aaattaaacttataaatatgctaaaccttaagcatctgtttagtatcagagatatagcta 371
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817  aaattaaacttataaatatgctaaaccttaagcatctgtttagtatcagagatatagcta 758

                                                                        
Query: 372  atgacttcaacttaaatatgtatctaaatcaggcaattactcatttcaaattagaattca 431
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757  atgacttcaacttaaatatgtatctaaatcaggcaattactcatttcaaattagaattca 698

                                                                        
Query: 432  aaattcagtctcgaattctaaatggccaaattatatgaaacattaataagaaaataaaat 491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697  aaattcagtctcgaattctaaatggccaaattatatgaaacattaataagaaaataaaat 638

                                                                        
Query: 492  atataactatgcatacatttaatttattcttgaagtcagtgctgtaggactactgatgtc 551
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 637  atataactatgcatacatttaatttattcttgaagtcagtgctgtaggactaatgatgtc 578

                                                                        
Query: 552  ctcattgaggaagttccttagccgagtttaataggatattttcacattaattttactata 611
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577  ctcattgaggaagttccttagccgagtttaataggatattttcacattaattttactata 518

                                                          
Query: 612  tacacatgatatgtgtgacatgattttaagccacctgactctgtga 657
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517  tacacatgatatgtgtgacatgattttaagccacctgactctgtga 472


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)