Query= MSMg01no497_k22.b1 MSMg01no497_k22.b1 CHROMAT_FILE:
MSMg01no497_k22.b1 PHD_FILE: MSMg01no497_k22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:28 2005
(153 letters)
>mm_chr11_36649433_36649986
Length = 554
Score = 252 bits (130), Expect = 1e-71
Identities = 142/146 (97%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 6 gaattcagcattcttatcgaaaaagaaac-ttaaatatatttaagcgaatggcctctgat 64
||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 351 gaattcagcattcagattgaaaaagaaacattaaatatatttaagcgaatggcctctgat 292
Query: 65 ttaccagcgatcatccccaaagagttcacagtgtgtttgaagatcagataaactgacagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ttaccagcgatcatccccaaagagttcacagtgtgtttgaagatcagataaactgacagc 232
Query: 125 ctccctggtgtacacaaagcaggtct 150
||||||||||||||||||||||||||
Sbjct: 231 ctccctggtgtacacaaagcaggtct 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 554
Length adjustment: 8
Effective length of query: 145
Effective length of database: 546
Effective search space: 79170
Effective search space used: 79170
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no497_k22.g1 MSMg01no497_k22.g1 CHROMAT_FILE:
MSMg01no497_k22.g1 PHD_FILE: MSMg01no497_k22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:28 2005
(604 letters)
>mm_chr11_36496295_36497296
Length = 1002
Score = 1141 bits (590), Expect = 0.0
Identities = 600/604 (99%), Gaps = 2/604 (0%)
Strand = Plus / Plus
Query: 1 ttttactgtaattcacttctgtgttcatatgaggtgcacagtgatttctcagtaccaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttactgtaattcacttctgtgttcatatgaggtgcacagtgatttctcagtaccaaag 260
Query: 61 gggttgatgaatgaatgagcaaatagtaaattctcttcttccccaggattgcctttttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 gggttgatgaatgaatgagcaaatagtaaattctcttcttccccaggattgactttttat 320
Query: 121 atactgtcctttcacacaggatttgttttgtgagatacatgttactgtttgttcaatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atactgtcctttcacacaggatttgttttgtgagatacatgttactgtttgttcaatata 380
Query: 181 aaattctcttagcctcaaagaatcctttctagattatgttagctcatggtaaatgctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaattctcttagcctcaaagaatcctttctagattatgttagctcatggtaaatgctctc 440
Query: 241 tcttctctcaaatttcaaaagcaccctttgcctggaacattttattacatatgattttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttctctcaaatttcaaaagcaccctttgcctggaacattttattacatatgattttac 500
Query: 301 aattaatcttaccttgccactgaagatgccatgttggtgagccatttttcttctaataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattaatcttaccttgccactgaagatgccatgttggtgagccatttttcttctaataat 560
Query: 361 actaggtcacttttactggattcatatcttatttctcacacattgatttcaagtgtcctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actaggtcacttttactggattcatatcttatttctcacacattgatttcaagtgtcctg 620
Query: 421 aaggctgaaagcattgtgtttatttcctgtataatatatattgctatacctttgagtatt 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 621 aaggctgaaagcattgtgtttattttctgtataatatatattgctatacctttgagtatt 680
Query: 481 cctggatacttaggctgtgcttataaaaaaacatgctgatttggtttttatatactgaac 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 681 cctggatacttaggctgtgcttataaaaaaacatgctgatttggtttttata--ctgaac 738
Query: 541 atcttgataggtatgcaattccacccttcagaatttatgggaagaaacttatcatacagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 atcttgataggtatgcaattccacccttcagaatttatgggaagaaacttatcatacagt 798
Query: 601 gcct 604
||||
Sbjct: 799 gcct 802
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1002
Length adjustment: 10
Effective length of query: 594
Effective length of database: 992
Effective search space: 589248
Effective search space used: 589248
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
