Query= MSMg01no498_e12.b1 MSMg01no498_e12.b1 CHROMAT_FILE:
MSMg01no498_e12.b1 PHD_FILE: MSMg01no498_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:14 2005
(592 letters)
>mm_chr11_8041850_8042843
Length = 994
Score = 1035 bits (535), Expect = 0.0
Identities = 579/603 (96%), Gaps = 16/603 (2%)
Strand = Plus / Minus
Query: 6 aatccaagaattgcgcaggaccctttgtataaacagcagttttactgagtgaatgatatt 65
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aatccaagaatggagcaggaccctttgtataaacagcagttttactgagtgaatgatatt 551
Query: 66 aaaatatttgcataaaagtcatacaatatgagggagaaaattgaattccttatgataaaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aaaatatttgcataaaagtcatacaatatgagggagaaaattgaattccttatgataaaa 491
Query: 126 attttatatttgatagaaaaga--cacatttaattttcttacaaatacatactcttgttt 183
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 490 attttatatttgatagaaaagactcacatttaattttcttacaaatacatactcttgttt 431
Query: 184 ttaaacattcttttcttcaaactcattgagatgttggctctttatttttgtcccatcttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttaaacattcttttcttcaaactcattgagatgttggctctttatttttgtcccatcttg 371
Query: 244 gaataaaacactgtaatagggagggggagtctatttaataatagttggctcaataagctg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaataaaacactgtaatagggagggggagtctatttaataatagttggctcaataagctg 311
Query: 304 gagttaggccccaagtacaaggaattaattatttcatctatttcattagcatgacttaag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gagttaggccccaagtacaaggaattaattatttcatctatttcattagcatgacttaag 251
Query: 364 gtgaacctgtcttcctgggaggaagaagggtcctttggccaggaa--------------a 409
||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 250 gtgaacctgtcttcctgggaggaagaagggtcctttggccaggaagttgacctggcccca 191
Query: 410 ttggcatgttgggtctgcacacacggtgaaatttttctcttccccaagaagaatgctgtc 469
|||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||
Sbjct: 190 ttggaatgttgggtctgcacacacggtaaaacttttcccttccccaagaagaatgctgtc 131
Query: 470 ttaacaggccttcattgctactttaatgttcatattaaattttcttattcttatttttaa 529
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 130 ttaacaggccttcattgctactttaatgctcatattaaattttcttattcttatttttaa 71
Query: 530 acattctttccttcaaactcactgaagaaactacttcccgaaagcctagagtcatttagg 589
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 70 acattctttccttcaaactcactgaagagactacttcccgaaagcctagagtcatttagg 11
Query: 590 aac 592
|||
Sbjct: 10 aac 8
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 994
Length adjustment: 10
Effective length of query: 582
Effective length of database: 984
Effective search space: 572688
Effective search space used: 572688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_e12.g1 MSMg01no498_e12.g1 CHROMAT_FILE:
MSMg01no498_e12.g1 PHD_FILE: MSMg01no498_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:15 2005
(163 letters)
>mm_chr11_8015613_8016174
Length = 562
Score = 292 bits (151), Expect = 7e-84
Identities = 160/163 (98%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 1 cttgcaggaatgtatttccttggctctacatattatgcaatcttcctttgaacagtaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgcaggaatgtatttccttggctctacatattatgcaatcttcctttgaacagtaacc 260
Query: 61 tgcagtaacactgccaccatccatcacagtgctatctgtttttgggtctctctctgtgtt 120
||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 261 tgcagtaccactgccaccatccatcacagtgctatctgttcttgg-tctctctctgtgtt 319
Query: 121 gcctggtttcattcatttacctgtcctccccactctacaatca 163
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gcctggtttcattcatttacctgtcctccccactctacaatca 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 562
Length adjustment: 8
Effective length of query: 155
Effective length of database: 554
Effective search space: 85870
Effective search space used: 85870
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
