Query= MSMg01no500_g10.b1 MSMg01no500_g10.b1 CHROMAT_FILE:
MSMg01no500_g10.b1 PHD_FILE: MSMg01no500_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:02 2005
(141 letters)
>mm_chr11_36756224_36756764
Length = 541
Score = 265 bits (137), Expect = 8e-76
Identities = 140/141 (99%)
Strand = Plus / Minus
Query: 1 tgtgaactgaggctgagcagtgcagaggtcagagtggaagtctcacttgctctgtgcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tgtgaactgaggctgagcagtgcagaggtcagagtggaagtctcacttgctctgtgcctt 282
Query: 61 tcttctggattaccagccgagcgtgcacaggtcacattaatagatcagcaaaacgaaagt 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 281 tcttctggattaccagccgagcatgcacaggtcacattaatagatcagcaaaacgaaagt 222
Query: 121 gaatgggcaaactgcagtagc 141
|||||||||||||||||||||
Sbjct: 221 gaatgggcaaactgcagtagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 541
Length adjustment: 8
Effective length of query: 133
Effective length of database: 533
Effective search space: 70889
Effective search space used: 70889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no500_g10.g1 MSMg01no500_g10.g1 CHROMAT_FILE:
MSMg01no500_g10.g1 PHD_FILE: MSMg01no500_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:02 2005
(626 letters)
>mm_chr11_36589655_36590679
Length = 1025
Score = 1149 bits (594), Expect = 0.0
Identities = 618/626 (98%), Gaps = 1/626 (0%)
Strand = Plus / Plus
Query: 1 agatctctgcctttgaagtcacatgacatctctacattaaactcttctagtggactgctt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 agatctctgcctttgaagtcacatgacatctctacattaagctcttctagtggactgctt 260
Query: 61 ctttggcccatgcctcttctcttgagaactatgaataaatctttggttcacccactgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttggcccatgcctcttctcttgagaactatgaataaatctttggttcacccactgcaa 320
Query: 121 ctaatgttccaacaatctgtatagcccagaatttcattacaaggaaaggaatttataatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaatgttccaacaatctgtatagcccagaatttcattacaaggaaaggaatttataatc 380
Query: 181 aaggcctccgaagagtcacagtgaagaaattctggaaggtgaccagggtaatatatatat 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||
Sbjct: 381 aaggcctccgaagagtcacagtgaagaaattctggaaagtgaccagggtaatataga-at 439
Query: 241 atgaagttgcattgcagtaagtctgagatactatgaaaaatgttaataaccaccaaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atgaagttgcattgcagtaagtctgagatactatgaaaaatgttaataaccaccaaagaa 499
Query: 301 acttgatgtttaggtagagagaatacctcccctttgaaatgttaatatctacttttataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acttgatgtttaggtagagagaatacctcccctttgaaatgttaatatctacttttataa 559
Query: 361 aggtgactgtcttggtaaaaattatttcaattccatattatgtattcacttataatctag 420
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 560 agatgactgtcttggtaaaaattatttcaattccaaattatgtattcacttataatctag 619
Query: 421 cagttttgaaggcaaatttagataatatgtttctaaaatgtaatctaagaatcatgcata 480
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 620 cagttttgaaggcacatttagataatatgtttctaaaatgtaatctaagtatcatgcata 679
Query: 481 tccaaataatatagatgtaaatgcaaatgttctttgacttcagtttgaaggctcaatctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tccaaataatatagatgtaaatgcaaatgttctttgacttcagtttgaaggctcaatctg 739
Query: 541 ttctgggcatttcctcatggatttttggtacaggtagtttgatataggacaattctgaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttctgggcatttcctcatggatttttggtacaggtagtttgatataggacaattctgaat 799
Query: 601 tttatatatttatgtgtagctgggcc 626
||||||||||||||||||||||||||
Sbjct: 800 tttatatatttatgtgtagctgggcc 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1025
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1015
Effective search space: 625240
Effective search space used: 625240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
