Query= MSMg01no502_o01.b1 MSMg01no502_o01.b1 CHROMAT_FILE:
MSMg01no502_o01.b1 PHD_FILE: MSMg01no502_o01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:01 2005
(236 letters)
>mm_chr11_50541423_50542058
Length = 636
Score = 456 bits (236), Expect = e-133
Identities = 236/236 (100%)
Strand = Plus / Minus
Query: 1 ataagataaatgaaaagcagctccttcaaatttagagtatttattataaaattgcactta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ataagataaatgaaaagcagctccttcaaatttagagtatttattataaaattgcactta 377
Query: 61 ttctaatacagtatgctaatatcatgagatatactgaataaaatgtccaaggacacaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ttctaatacagtatgctaatatcatgagatatactgaataaaatgtccaaggacacaccc 317
Query: 121 agacagctgggtgaaaaaaggctttgaacataaacacccatttgactcctttctggaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 agacagctgggtgaaaaaaggctttgaacataaacacccatttgactcctttctggaatc 257
Query: 181 catctgtctggaaagtgtcagtcagggatttttattttaaattcccaaagctctaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 catctgtctggaaagtgtcagtcagggatttttattttaaattcccaaagctctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no502_o01.g1 MSMg01no502_o01.g1 CHROMAT_FILE:
MSMg01no502_o01.g1 PHD_FILE: MSMg01no502_o01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:01 2005
(331 letters)
>mm_chr11_50449731_50450460
Length = 730
Score = 400 bits (207), Expect = e-116
Identities = 225/231 (97%), Gaps = 3/231 (1%)
Strand = Plus / Plus
Query: 1 gagggtccctggcagccagcaccctatggatccactcaagaattcagcgggggacagggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 gagggtccctggcagccagcaccctatggatccactcaagaattcagcgggggg-agggg 259
Query: 61 gg-aggcttgattcagttagtaatgtgattgcttgagggcctgaatttgatcctcagaat 119
|| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 260 gggaggcttgattcagttagtaatgcgattgcttgagggcctgaatttgatcttcagaat 319
Query: 120 ccatgtgaaaggtcagatgtgaaaaacaaaacaaaaaaacaacaaaaatgttagatgtgc 179
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 320 ccatgtgaaaggtcagatgtgaaaaacaaaacaaaaaa-caacaaaaatgttagatgtgc 378
Query: 180 ttggcacacttgcagtcccagtgctggggaggtaaagacaggcaactccct 230
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttggcacacttgcagtcccagtgctggggaggtaaagacaggcaactccct 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 730
Length adjustment: 9
Effective length of query: 322
Effective length of database: 721
Effective search space: 232162
Effective search space used: 232162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
