Query= MSMg01no503_h12.b1 MSMg01no503_h12.b1 CHROMAT_FILE:
MSMg01no503_h12.b1 PHD_FILE: MSMg01no503_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:45 2005
(435 letters)
>mm_chr11_90094061_90094895
Length = 835
Score = 779 bits (403), Expect = 0.0
Identities = 427/435 (98%)
Strand = Plus / Plus
Query: 1 acataaggcatctgcttgtgtctgaacatgactcatagggcagacttgtgccaacccatc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 acataaggcatctgcttgtgtctgaacatgactcaaagggcagacttgtgccaacccatc 260
Query: 61 tgttcctctgagaatatatccagaattaatgatattagaaactttaaaacaacaggctca 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 tgttcctctgagaatatatccagaattaatgatattagaaacttaaaaacaacaggctca 320
Query: 121 ttctgacagatgaccctggtgggtggatagaaaaagaccatgtggcaaaatgcatagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 ttctgacagatgaccctggtgggtggatagaaaaagaccatgtggcaaaatgcatggttg 380
Query: 181 gtatcccctccttttgctgtgccctaaagaaaatctagagatgctttcttggctgagtat 240
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 gtatcctctccttttgctgtgccctaaagaaaatctagagatgccttcttggctgagtat 440
Query: 241 ttctactcaaaagaaaaacaaccaaatctataaacttaactaagctatgtgggtagctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cactactcaaaagaaaaacaaccaaatctataaacttaactaagctatgtgggtagctaa 500
Query: 301 agtataagataagatatattttacaaggtaccctcacacaaaattctctgggcaagaatc 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 agtataagataagatatattttacaaggtcccctcacacaaaattctctgggcaagaatc 560
Query: 361 tcactaaagaccttttgttcagtctgagaagctagtctataggatttcccatctacattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcactaaagaccttttgttcagtctgagaagctagtctataggatttcccatctacattc 620
Query: 421 acattgtgctgtttc 435
|||||||||||||||
Sbjct: 621 acattgtgctgtttc 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_h12.g1 MSMg01no503_h12.g1 CHROMAT_FILE:
MSMg01no503_h12.g1 PHD_FILE: MSMg01no503_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:45 2005
(457 letters)
>mm_chr11_90181368_90182223
Length = 856
Score = 830 bits (429), Expect = 0.0
Identities = 450/457 (98%), Gaps = 1/457 (0%)
Strand = Plus / Minus
Query: 1 agtggctgctgtccctgaaggaacaggagaggttatacagacaaagcgccaagagttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 agtggctgctgtccctgaaggaacaggagaggttatacagacaaagcgccaagagttcag 597
Query: 61 ggttgagaatccagggatgatgatgagacagaggctagtgacacagggacagcccatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ggttgagaatccagggatgatgatgagacagaggctagtgacacagggacagcccatgaa 537
Query: 121 atgccagggcttgctgcaaagccaccagaagtctgaaagagaccaggaaggagctttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 atgccagggcttgctgcaaagccaccagaagtctgaaagagaccaggaaggagctttccc 477
Query: 181 taaaaccttcagagagtaaagaagacggctttgaaactttgatctataaaaaaaaaatat 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 476 taaaaccttcagagagtaaagaagacggctttgaaactttgatctat-aaaaaaaaatat 418
Query: 241 tatcttgacttgttttaaggtacccgttgaagagtttaattataccactcctaggaacat 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 417 gagcttgacttgttttaaggtacccgttgaagagtttaattataccactcctaggaacgt 358
Query: 301 ggtattaaatatctcctctacagactatactcagggtaaacaaagcatctgtatttttct 360
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 357 ggtattaaatatctcctcttcagactatactcagggtaaacaaagcatttgtatttttct 298
Query: 361 gaacatgtctttgtttccctatccagtggctgcctatctcctgtgctccaggcccccagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gaacatgtctttgtttccctatccagtggctgcctatctcctgtgctccaggcccccagg 238
Query: 421 tcagtgcctccttcacccttatgctcctgagtagctt 457
||||||||||||||||||||| |||||||||||||||
Sbjct: 237 tcagtgcctccttcacccttaggctcctgagtagctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 856
Length adjustment: 10
Effective length of query: 447
Effective length of database: 846
Effective search space: 378162
Effective search space used: 378162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
