Query= MSMg01no506_c08.b1 MSMg01no506_c08.b1 CHROMAT_FILE:
MSMg01no506_c08.b1 PHD_FILE: MSMg01no506_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:14 2005
(548 letters)
>mm_chr11_29572986_29573937
Length = 952
Score = 953 bits (493), Expect = 0.0
Identities = 534/551 (96%), Gaps = 8/551 (1%)
Strand = Plus / Plus
Query: 4 gaattcaagagggtttgcggagagccagcatctgtggatccaagagatgaccgagagaaa 63
|||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 204 gaattcaagagggtctgtggagagccagcatctgaggatccaagagatgaccgagagaaa 263
Query: 64 acagtctgtcgactacaaactgtgctgaccatcgtaagagaacatttggaatatgctacc 123
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acagtctgtcgactacaaaccgtgctgaccatcgtaagagaacatttggaatatgctacc 323
Query: 124 aaactccactagaatccaacaattcggaaattgtaaagcttagagcaggctgtaagtggc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaactccactagaatccaacaattcggaaattgtaaagcttagagcaggctgtaagtggc 383
Query: 184 tagtagctggc----atgtatagcatagaaagtccatatgggtaaaagactggatctgag 239
||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 384 tagtagctggctggcatgtatagcatagaaagtccatatggataaaaaactggatctgag 443
Query: 240 atttc--gtacagcatatttaacattaccacctacacattcagtgtaaagctgttcgtgc 297
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atttcctgtg--gcatatttaacattaccacctacacattcagtgtaaagctgttcgtgc 501
Query: 298 tgaagggaaacccccttttccctcctacatggtatctcagcttagctttggtgaaatccg 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 502 tgaagggaaacccccttttccctcctacatggtatctcagcttagctttggtgagatccg 561
Query: 358 taggtggtttcctatctgcccagaacaaatatccatactagacagactgacttagtagta 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 taggtggtttcctatctgcccagaacaaatatccatactagacagactgacttagtagta 621
Query: 418 tttgatagataataatgctatgcactcaacaaaatttaagatagtcttttcttccttatc 477
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tttaatagataataatgctatgcactcaacaaaatttaagatagtcttttcttccttatc 681
Query: 478 ctttgtgctccaccagtcctggaggcctgtctttaactgtgcatgtgtgtttagcatgta 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctttgtgctccaccagtcctggaggcctgtctttaactgtgcatgtgtgtttagcatgta 741
Query: 538 tatgtgaaggg 548
|||||||||||
Sbjct: 742 tatgtgaaggg 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 952
Length adjustment: 10
Effective length of query: 538
Effective length of database: 942
Effective search space: 506796
Effective search space used: 506796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_c08.g1 MSMg01no506_c08.g1 CHROMAT_FILE:
MSMg01no506_c08.g1 PHD_FILE: MSMg01no506_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:14 2005
(536 letters)
>mm_chr11_29736313_29737248
Length = 936
Score = 928 bits (480), Expect = 0.0
Identities = 522/536 (97%)
Strand = Plus / Minus
Query: 1 agaattcaggaaaatcacaggtgaggttaaaagcaacttactggtctccagtgtcaggac 60
|||||||||||| |||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 736 agaattcaggaagatcacaggtgaggttagaagccacttactggtctccaatgtcaggac 677
Query: 61 tcaagaataatgaagtcagtgagagttagtatcttctctgtatctccagaccttatgagt 120
||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||
Sbjct: 676 tcaagaataatgaagtcagtgagagttggcatcttctctgtatctccagaccttaagagt 617
Query: 121 ggactcgagtctttgaaatggagatgtgtgtgagggtctgttatgagagcgggtgatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ggactcgagtctttgaaatggagatgtgtgtgagggtctgttatgagagcgggtgatgat 557
Query: 181 atgaatagtactgtcagaattaaatgcccatgagtaaaatataaccctgtgagaagatac 240
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 556 atgaatagtactgtcagaattaaatgcccatgaataaaacataaccctgtgagaagatac 497
Query: 241 aaagtgggcaatggagtgaatgaggacagggagactgcagggtgagcatgagaggagcag 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aaagtgggcaatggagtaaatgaggacagggagactgcagggtgagcatgagaggagcag 437
Query: 301 tggagccttcctcagccatttgctcgagtaccaaggtcctcagatcaacccaaattctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tggagccttcctcagccatttgctcgagtaccaaggtcctcagatcaacccaaattctac 377
Query: 361 cttgaatgctacagttcataaattttgcagttttgcctgtgctcttcaagcttttgtgcc 420
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cttgaatgctacagtccataagttttgcagttttgcctgtgctcttcaagcttttgtgcc 317
Query: 421 aaaattactgggaaaggttaataaaaatatgtaggagtcttggtataaataaaaactgat 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 316 aaaattactgggaaaggttaataagaatatgtaggagtcttggtataaataaaaactgat 257
Query: 481 aaaacttgactcttacaagtcaggataccattatcaaatggttttcattgctgagc 536
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 256 aaaacttgactcttacaagtcaggataccattattaaatggttttcattgctgagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
