Query= MSMg01no507_c24.b1 MSMg01no507_c24.b1 CHROMAT_FILE:
MSMg01no507_c24.b1 PHD_FILE: MSMg01no507_c24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:38 2005
(599 letters)
>mm_chr11_82586166_82587164
Length = 999
Score = 1123 bits (581), Expect = 0.0
Identities = 590/593 (99%)
Strand = Plus / Plus
Query: 7 attcaattcaggctgtcaggcatacgtagcaagtgattttttgactcactgagccatctt 66
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 207 attcagttcaggctgtcaggcatatgtagcaagtgattttttgactcactgagccatctt 266
Query: 67 actgttcgtctgcatatgtctttgagggcatttttggagaggtttagctgaggatgggaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 actgttcgtctgcatatgtctttgagggcatttttggagaggtttagctgaggatgggaa 326
Query: 127 agcccattctgaatatggaaagaaggggaaggaggaggaaaaagaaaaggaaaaagaaga 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agcccattctgaatatggaaagaaggggaaggaggaggaaaaagaaaaggaaaaagaaga 386
Query: 187 ggaagaagaaaaggaagaggaggaggagaattcgaagaagccacctctacagcctgctga 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggaagaagaaaaggaagaggaggaggagaattcgaagaagccacctctacagcctgctga 446
Query: 247 cagtgaaaaacagagctgagctgaattactattataccccggcatgcagctcttttaaat 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cagtgaaaaacagagctgagctgaattactattataccccggcatgcagctcttttaaat 506
Query: 307 acttatcctggcaaacacctctaccatatttctttaaaacttcttttaactgtgtgacta 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 acttatcctggcaaacacctctaccatatttctttaaaacttcttttaactgtgtgacta 566
Query: 367 ttaagcaaaccaaaagtgtaagctcggatcttgctgctgagatttatgtgattcataggg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttaagcaaaccaaaagtgtaagctcggatcttgctgctgagatttatgtgattcataggg 626
Query: 427 cagaacttattaaaaacggaatccactgagaccaaaccaacttcccaagtgtctgccttc 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cagaacttattaaaaacggaatccactgagaccaaaccaacttcccaagtgtctgccttc 686
Query: 487 tccaggaagacatgaagtgtttgttctagcactgtctgtggcttccaagtgagcagcaca 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 687 tccaggaagacatgaagtgtttgttctagcactgtctgtggcttccaagtgagcagcgca 746
Query: 547 gaaacctctacacagctctctggggtctttgctgttgtttctctttttaagat 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gaaacctctacacagctctctggggtctttgctgttgtttctctttttaagat 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_c24.g1 MSMg01no507_c24.g1 CHROMAT_FILE:
MSMg01no507_c24.g1 PHD_FILE: MSMg01no507_c24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:38 2005
(479 letters)
>mm_chr11_82768401_82769279
Length = 879
Score = 895 bits (463), Expect = 0.0
Identities = 477/485 (98%), Gaps = 6/485 (1%)
Strand = Plus / Minus
Query: 1 ctgcagctatgcctggcagaatttcatgaacaaaattagtgactatttggaacaatagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ctgcagctatgcctggcagaatttcatgaacaaaattagtgactatttggaacaatagga 532
Query: 61 gtggcagtttgatgcagactttcagcatttaggaaggtgtgtgatttggtagcatacctc 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 531 gtggcagtttgatgcagactttcagcatttaggaaggtgtgtgattcggtagcatacctc 472
Query: 121 taagaagcaagtttgg------tttttttttttttttctagatgagtagagtatttagac 174
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 471 taagaagcaagtttggtttttttttttttttttttttctagatgagtagagtatttagac 412
Query: 175 atagaacaccctgaagagctatcaatcaacaggaagcatgaaagccatctccacacctgc 234
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 411 atagaacaccctgaagagctatcaatcaacaggaagcgtgaaagccatctccacacctgc 352
Query: 235 atctcatgtcaccaacctttgaatccagacccaaccatctgtgtcccctcatgaggttgg 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atctcatgtcaccaacctttgaatccagacccaaccatctgtgtcccctcatgaggttgg 292
Query: 295 ctgcaaaccagagagatgactttttggatcaaagctagaatctcatgacaaaaactcaag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ctgcaaaccagagagatgactttttggatcaaagctagaatctcatgacaaaaactcaag 232
Query: 355 atagatggagaaccatatctggttttattagtgacctacgattcttggtctaaacggaca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atagatggagaaccatatctggttttattagtgacctacgattcttggtctaaacggaca 172
Query: 415 ccagttcagggagaattgcaaagttgctggtctgtagggccagttctccccagcaactct 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ccagttcagggagaattgcaaagttgctggtctgtagggccagttctccccagcaactct 112
Query: 475 cattg 479
|||||
Sbjct: 111 cattg 107
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
