Query= MSMg01no507_e07.b1 MSMg01no507_e07.b1 CHROMAT_FILE:
MSMg01no507_e07.b1 PHD_FILE: MSMg01no507_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:45 2005
(679 letters)
>mm_chr11_47481003_47482082
Length = 1080
Score = 1272 bits (658), Expect = 0.0
Identities = 672/678 (99%), Gaps = 5/678 (0%)
Strand = Plus / Minus
Query: 5 gaattcttcagatctcttggagaaag-atattctttctctcacccgtgcttctcaacttt 63
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 880 gaattcttcagatctcttggagaaagtatattctttctctcacccgtgcttctcaacttt 821
Query: 64 caacatccttaatattagttctcttggcttttattttgaaatgacttttcttgggattat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 caacatccttaatattagttctcttggcttttattttgaaatgacttttcttgggattat 761
Query: 124 gtgaaataggatggggctggcaaaaggcattatgggtagtcccttagctcatggaaatga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 gtgaaataggatggggctggcaaaaggcattatgggtagtcccttagctcatggaaatga 701
Query: 184 aaactaaatgttgccttctttggtggttgatccatttgggcatattgacaagatgcttga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 aaactaaatgttgccttctttggtggttgatccatttgggcatattgacaagatgcttga 641
Query: 244 ctagataaatgacttcttgtcttcagtcaacccacattacaacctaggaggttgagaggg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ctagataaatgacttcttgtcttcagtcaacccacattacaacctaggaggttgagaggg 581
Query: 304 ttttgaactaaaattgatcctgtttaatattttaattttagtttaaaatgtaaggataat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ttttgaactaaaattgatcctgtttaatattttaattttagtttaaaatgtaaggataat 521
Query: 364 ttggcaattttttggtttgtttgttcataggggaattatttttaaaatagtgaccactgg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ttggcaattttttggtttgtttgttcataggggaattatttttaaaatagtgaccactgg 461
Query: 424 gggtcccagaaatttccaataaagcattgttataaaacaaacaaaccttcagaagacctt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gggtcccagaaatttccaataaagcattgttataaaacaaacaaaccttcagaagacctt 401
Query: 484 acattatccttccttgatttgtatattatagatgttttgatgttcttcaagtggaagatc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 acattatccttccttgatttgtatattatagatgttttgatgttcttcaagtggaagatc 341
Query: 544 accgcattggcgatccattagatactgtattaggaacaaaggtaagacactgattctgct 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 accgcattggcgatccattagatactgtattaggaacaaaggtaagacactgattctgct 281
Query: 604 ttaacttgaaaaacaagttgttttaccatttttt--atcactatctttgagaagtccatc 661
|| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 280 tttacttgaaaaacaagttgttttaccatttttttaatcactatctttgagaagtccatc 221
Query: 662 tatgtttttcatgcttaa 679
||||||||||||||||
Sbjct: 220 --tgtttttcatgcttaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1080
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1070
Effective search space: 715830
Effective search space used: 715830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_e07.g1 MSMg01no507_e07.g1 CHROMAT_FILE:
MSMg01no507_e07.g1 PHD_FILE: MSMg01no507_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:45 2005
(343 letters)
>mm_chr11_47380631_47381373
Length = 743
Score = 592 bits (306), Expect = e-173
Identities = 318/322 (98%)
Strand = Plus / Plus
Query: 1 tttttacatgctttccctaagagaatagatttatttattcagccaaagtaaaatagtaag 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttttacatgctttccctaggagaatagatttatttattcagccaaagtaaaatagtaag 260
Query: 61 tttccgacagctttctgtctgagagtcttcagttattaagtacagctaactgattctgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttccgacagctttctgtctgagagtcttcagttattaagtacagctaactgattctgta 320
Query: 121 actctcactctggtgagtaacagagtggctctcctctgtttgctgaaggactctcagagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actctcactctggtgagtaacagagtggctctcctctgtttgctgaaggactctcagagt 380
Query: 181 ttatgtttttaactagaattcattatctgtgacaattaaatggtagatcttagcttattt 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 ttatgtttttaactagaatacattatctgtgacaattaaatggtagatcttagtttattt 440
Query: 241 gcataatttggttcatctttaaactttactttgttctgcaaatacaggtatcatcttaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcataatttggttcatctttaaactttactttgttctgcaaatacaggtatcatcttaag 500
Query: 301 ttgtggggtgtgtgtgtgtgtg 322
||||||||| ||||||||||||
Sbjct: 501 ttgtggggtatgtgtgtgtgtg 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
