Query= MSMg01no507_l11.b1 MSMg01no507_l11.b1 CHROMAT_FILE:
MSMg01no507_l11.b1 PHD_FILE: MSMg01no507_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:21 2005
(376 letters)
>mm_chr11_38037811_38038586
Length = 776
Score = 681 bits (352), Expect = 0.0
Identities = 370/376 (98%)
Strand = Plus / Minus
Query: 1 gcagtggctcagaactagagaaagtttttaagtaaaccatggacaccagcagatgtttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 576 gcagtggctcagaactagagaaagtttttaagtaaaccatggacaccagcagaagtttct 517
Query: 61 gaataatagttatttttatttattagcacaacactaattatctggctaaggtagaatgtt 120
||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||
Sbjct: 516 gaataatagttatttttatttattagcacaatagtaattatctggctaaggtagattgtt 457
Query: 121 aaatatattgcatgttataaaattctgaaggtaatagtaattagtattcggaggatgttg 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 456 aaatatattgcatgttataaaattctgaaggtagtagtaattagtattcggaggatgttg 397
Query: 181 aagtcatttaacccgcattggtattacagtaagtaacttgattaggtgccatgctaccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aagtcatttaacccgcattggtattacagtaagtaacttgattaggtgccatgctaccta 337
Query: 241 ttaccttaattatactgcttattgatgtaatgccaaaatttctactcttttatcaattgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttaccttaattatactgcttattgatgtaatgccaaaatttctactcttttatcaattgg 277
Query: 301 aatacctacaccacaattactctatacaatatctaagcctgttctctttcctcagtggca 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 276 aatacctacaccacaattactctatacaatacctaagcctgttctctttcctcagtggca 217
Query: 361 caatgccttctgacag 376
||||||||||||||||
Sbjct: 216 caatgccttctgacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_l11.g1 MSMg01no507_l11.g1 CHROMAT_FILE:
MSMg01no507_l11.g1 PHD_FILE: MSMg01no507_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:21 2005
(658 letters)
>mm_chr11_37897111_37898166
Length = 1056
Score = 1222 bits (632), Expect = 0.0
Identities = 651/658 (98%), Gaps = 2/658 (0%)
Strand = Plus / Plus
Query: 1 ccatcaagagagtgataacagaaaacaacctacccaaaccttaatctcaaatatcccgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccatcaagagagtgataacagaaaacaacctacccaaaccttaatctcaaatatcccgtg 260
Query: 61 tacttaactacaactccaagacaaaggtccagttgctacttagtttcttagtatgttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacttaactacaactccaagacaaaggtccagttgctacttagtttcttagtatgttgtt 320
Query: 121 atttttgatgtatcaatccaaatgaactaaaacattatttaaactgttccttttagcatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttttgatgtatcaatccaaatgaactaaaacattatttaaactgttccttttagcatt 380
Query: 181 cagtcaagacgtatcactaaataccaactaagtgctctctgttccaaccaaactctattg 240
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtcaagac--atcactaaataccaactaagtgctctctgttccaaccaaactctattg 438
Query: 241 agaactattttttttttctatcaacataattgctatgttactttttttcttaactcatac 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agaactatttacattttctatcaacataattgctatgttactttttttcttaactcatac 498
Query: 301 tgttttggctgttgcctctggaccacactatttctcactacaatcacagaggatgtccag 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 499 tgttttggctgttgcctctggaccacactatttctcactacaatcacagaggatgtacag 558
Query: 361 gcttctaatgttatttcagtctccccatttctgccttgccagcacttgtcacagacattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gcttctaatgttatttcagtctccccatttctgccttgccagcacttgtcacagacattc 618
Query: 421 aatcttgtccatccttgtagaaacgttttatttgtcctagattcttaatgcaatattgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aatcttgtccatccttgtagaaacgttttatttgtcctagattcttaatgcaatattgac 678
Query: 481 ttggtctcatttcccttagctgtctgtttcccacttctctactgaatgctagcttcattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttggtctcatttcccttagctgtctgtttcccacttctctactgaatgctagcttcattt 738
Query: 541 agcaaaactctctctgttcccctgtctctcgaaaggttgtagagagtgtttcctttctat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 agcaaaactctctctgttcccctgtctctcgaaaggttgtagagagtgtttcctttctat 798
Query: 601 caagtctgctttttaagcacagggtctctcactagtttcgcatatttaccataccagc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 caagtctgctttttaagcacagggtctctcactagtttcgcatatttaccataccagc 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1056
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1046
Effective search space: 677808
Effective search space used: 677808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
