Query= MSMg01no508_h16.b1 MSMg01no508_h16.b1 CHROMAT_FILE:
MSMg01no508_h16.b1 PHD_FILE: MSMg01no508_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:24 2005
(691 letters)
>mm_chr11_6171228_6172318
Length = 1091
Score = 1307 bits (676), Expect = 0.0
Identities = 685/688 (99%)
Strand = Plus / Minus
Query: 4 ggaattcagagatttgccttcctctgccccctgagtgctggaattagaggtgtgcaccac 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 ggaattcagagattggccttcctctgccccctgagtgctggaattagaggtgtgcaccac 964
Query: 64 tacctccagctttagaattctcctcttaagattgaataatagtctgttgtatgtatagac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 tacctccagctttagaattctcctcttaagattgaataatagtctgttgtatgtatagac 904
Query: 124 ctcatcttgttttggatagttatttctaaattgtatgatccagtctagagaggacagtgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 ctcatcttgttttggatagttatttctaaattgtatgatccagtctagagaggacagtgt 844
Query: 184 acaatttagtaatcccattgcttgcttgttttccatggcctcttagtggagaaagcatgg 243
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 acactttagtaatcccattgcttgcttgttttccatggcctcttagtggagaaagcatgg 784
Query: 244 tttcagtcggaacagaaatggttgtaaagaatgttcctttccttcctgggggcagtctca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 tttcagtcggaacagaaatggttgtaaagaatgttcctttccttcctgggggcagtctca 724
Query: 304 gtggaaggactagcctctgcatggaattacaggtggtattccacaggcatttggtctgaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gtggaaggactagcctctgcatggaattacaggtggtattccacaggcatttggtctgaa 664
Query: 364 gttgtgcggtcacaccaatgaagggccttataatagcaggttctgttttcctgcccattc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gttgtgcggtcacaccaatgaagggccttataatagcaggttctgttttcctgcccattc 604
Query: 424 taattctttgttcattgtcctatgcagtatcgtgaagagcgcttccgtctgaccagtgag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 taattctttgttcattgtcctatgcagtatcgtgaagagcgcttccgtctgaccagtgag 544
Query: 484 agcaccaaccagagggtcctgtggtggtccatcgcccagaccgttatcctcatcctcact 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agcaccaaccagagggtcctgtggtggtccatcgcccagaccgttatcctcatcctcact 484
Query: 544 ggcatctggcagatgcgtcacctcaagagcttctttgaggccaagaagctggtgtagggg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggcatctggcagatgcgtcacctcaagagcttctttgaggccaagaagctggtgtagggg 424
Query: 604 tctcgccctataaccttccccttttacctcaattatttgataatttccccgcccagcccc 663
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 423 tctcgccctataaccttccccttttacctcaattatttgataatttccccacccagcccc 364
Query: 664 tcatccacctggaatttgaggaggagaa 691
||||||||||||||||||||||||||||
Sbjct: 363 tcatccacctggaatttgaggaggagaa 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no508_h16.g1 MSMg01no508_h16.g1 CHROMAT_FILE:
MSMg01no508_h16.g1 PHD_FILE: MSMg01no508_h16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:24 2005
(333 letters)
>mm_chr11_5982051_5982783
Length = 733
Score = 644 bits (333), Expect = 0.0
Identities = 333/333 (100%)
Strand = Plus / Plus
Query: 1 gcacttgttatcgggtaaccagtgtgctcttccctgaggacagctgttcctcctctctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcacttgttatcgggtaaccagtgtgctcttccctgaggacagctgttcctcctctctca 260
Query: 61 gcactgcatgtggtctttgcagagttcagtccttctaaacttgcctccatccacagtggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcactgcatgtggtctttgcagagttcagtccttctaaacttgcctccatccacagtggc 320
Query: 121 atgtctattgctgttcagattagtttctgtctcataaataaaagataaccagggggtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtctattgctgttcagattagtttctgtctcataaataaaagataaccagggggtaaa 380
Query: 181 tggtccgggcagctcactgtctagttctcttctttggaaatgtgtctcattaagttctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtccgggcagctcactgtctagttctcttctttggaaatgtgtctcattaagttctgg 440
Query: 241 ctgctggcagctgcctactgccattcaaataattgtttaacctggactttctagctattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgctggcagctgcctactgccattcaaataattgtttaacctggactttctagctattc 500
Query: 301 tcaatgttctcctgggggaatattactttaacc 333
|||||||||||||||||||||||||||||||||
Sbjct: 501 tcaatgttctcctgggggaatattactttaacc 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
