XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAC
TTGAGGAATTCCGAATGGCTGAGAAGCACCTGAAAAAATGTTCAGCATCC
TTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCAC
ACCAGTCAGAATGGCTAAGATCAAATATTCAGGTGACTGCAGATGCTGGC
GAGGATGTGGAGAAAGAGGATCACTCCTCGATTGTTGGTGGGATTGCAAG
CTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAAAAAATTGCA
CTTAGTACTACCAGAGGATCCTGCAATACCTCTCCTGGGCATATATCCAG
AAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCA
ACCTTATTTATAATAGCCAAAAGCTGGAAAGAACCCAGATGCCCCTCAAC
AGAGGAATGGATACAGAAAATGTGGTACATTTACTCAATGGAGTACTACT
TAGGTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGAC
CTGGAGGGCATCATCCTGAGTGAGGTAACTCAATCACAAAAGAACTCACA
TGATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGGATACC
CAAGATATAAGACACAATTCGCGAAACACATGAAACTCAAGAAGATCGAA
GACCAAAGTGTGGACACTTTGCCTCTTCTTAGAATTGGGAACAAAACACC
CATGGAAGGAGTTACN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCAAATGGTCATCACTGGTATCTATAAATAAAAC
TTACATTTATAAATTAATTTTCTATAGTTTCCTAAACTCATTTGGTCTGC
TAGCTTTTTCCCCCCAGTTTCTTTGTGAATTTTCTTTATGCACAGCTAAG
TCTTTTACATAGACACAATTTTGATTATTTCTCTCTAAACATATATTTGG
AATATGGAGTGTGTGTGTGTTGTTGTTGTTTGTTTGTTTCTTGGCTAGCT
TGTGAGAAGCTGTTACTTGGCAGCTCAGTCTAGCTTCCAACTTGAGATAC
TCATGTCTCAGCCTCCTATGTGCCAGGACCATAGGCATGCCTTCACACCT
GTCACCTCTCCTTGACAGTTGACAGCAATGTACTTTGCCCATTACTATTT
CAAACAAAATTAATCAAATTGCTTTATATGTTTCGTGTGTATTATGAATC
CCACTCCTATGTGGTGAATAGTCTTACCACTTCTAGCTTGAGTTCTTAGT
CTTTCTGATGAGGAATCTGTTGCTGGCTATGTTGCTGAGTGCCGCTCTCC
TTTCACTGTCACATGTTCGTCAGGTTGTTGTTGAGCCTGAGGTGCTACAA
GCACACATTTCATATAAGCATCGCTAGTCTAACTCAGGGTTGCAGATTCT
GGCTTTGTTCCCTCCTCTTCCCTGGCTGCTCAGTTCTTACCACATTTTGT
GTTATTTGAATGTGGTCTAAAAGCTACCG

Query= MSMg01no512_h13.g1 MSMg01no512_h13.g1 CHROMAT_FILE:
MSMg01no512_h13.g1 PHD_FILE: MSMg01no512_h13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:38 2005
         (560 letters)



>mm_chr11_91040349_91041308
          Length = 960

 Score =  727 bits (376), Expect = 0.0
 Identities = 404/426 (94%), Gaps = 20/426 (4%)
 Strand = Plus / Minus

                                                                       
Query: 155 tgattatttctctctaaacatatatttggaatatggagtgtgtgtg-------------- 200
           ||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct: 960 tgattatttctctctaaacatatatttggaatatggagtgtgtgtgtgtgttgttgttgt 901

                                                                       
Query: 201 ------tgttgttgttgtttgtttgtttcttggctagcttgtgagaagctgttacttggc 254
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 tgttgttgttgttgttgtttgtttgtttcttggctagcttgtgagaagctgttacttggc 841

                                                                       
Query: 255 agctcagtctagcttccaacttgagatactcatgtctcagcctcctatgtgccaggacca 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 agctcagtctagcttccaacttgagatactcatgtctcagcctcctatgtgccaggacca 781

                                                                       
Query: 315 taggcatgccttcacacctgtcacctctccttgacagttgacagcaatgtactttgccca 374
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 taggcatgccttcacacctgtcacctctccttgacagttgacagcaatgtactttgccca 721

                                                                       
Query: 375 ttactatttcaaacaaaattaatcaaattgctttatatgtttcgtgtgtattatgaatcc 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ttactatttcaaacaaaattaatcaaattgctttatatgtttcgtgtgtattatgaatcc 661

                                                                       
Query: 435 cactcctatgtggtgaatagtcttaccacttctagcttgagttcttagtctttctgatga 494
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cactcctatgtggtgaatagtcttaccacttctagcttgagttcttagtctttctgatga 601

                                                                       
Query: 495 ggaatctgttgctggctatgttgctgagtgccgctctcctttcactgtcacatgttcgtc 554
           |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 600 ggaatctgttgctggctatgttgctgggggccgctctcctttcactgtcacatgttcgtc 541

                 
Query: 555 aggttg 560
           ||||||
Sbjct: 540 aggttg 535


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space:   522500
Effective search space used:   522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)