Query= MSMg01no512_k03.b1 MSMg01no512_k03.b1 CHROMAT_FILE:
MSMg01no512_k03.b1 PHD_FILE: MSMg01no512_k03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:51 2005
(377 letters)
>mm_chr11_69983357_69984131
Length = 775
Score = 687 bits (355), Expect = 0.0
Identities = 371/377 (98%), Gaps = 2/377 (0%)
Strand = Plus / Plus
Query: 1 tggtcaactccctggaggagcaggtgatgcttgggtgggctctttttcggaggctctcag 60
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 201 tggtcaactccctggaggagcaggtgatgcttggatgggctctttttgggaggctctcag 260
Query: 61 gctctggtctgagggagaggtaaccatgcccttttctttctttagaattttctacagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctctggtctgagggagaggtaaccatgcccttttctttctttagaattttctacagaat 320
Query: 121 cgcttagccaatgtggttagttggatcggcctaacggaccaaaacgggccctggcgatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgcttagccaatgtggttagttggatcggcctaacggaccaaaacgggccctggcgatgg 380
Query: 181 gtggatgggaccgactttgagaaaggctttaagtgagtgtgtgttgtacatttgccctgc 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 gtggatgggaccgactttgagaaaggctttaagtgagtgtgtgctgtacatttgccctgc 440
Query: 241 tctagtggcctttgcttgggactacctcttccttcaaggctctggccctggggtagatgg 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcgtggcctttgcttgggactacctcttccttcaaggctctggccctggggtagatgg 500
Query: 301 tagaatctggggatatggcttagagcctggtttctggaggctgacatctgtgtgtttgtt 360
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 tagaatctggggatatggcttagagcctggtttctggaggctgacat--gtgtgtttgtt 558
Query: 361 cataggaactgggcccc 377
|||||||||||||||||
Sbjct: 559 cataggaactgggcccc 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 775
Length adjustment: 9
Effective length of query: 368
Effective length of database: 766
Effective search space: 281888
Effective search space used: 281888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no512_k03.g1 MSMg01no512_k03.g1 CHROMAT_FILE:
MSMg01no512_k03.g1 PHD_FILE: MSMg01no512_k03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:51 2005
(405 letters)
>mm_chr11_70112247_70113051
Length = 805
Score = 501 bits (259), Expect = e-146
Identities = 287/297 (96%), Gaps = 4/297 (1%)
Strand = Plus / Minus
Query: 1 aaggccagcatgatctacatacagagttctgggttag-ccagggctacatagtgagatga 59
|||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 574 aaggccagcatggtctacatacagagttctgggttagcccagggctacatagt-agatga 516
Query: 60 tgtcttaaattaaaaaaaaaagaataaatgtaaagtaaacagtccatttatgaaacaatg 119
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 515 tgtcttaaattaaaaaaaaa--aataaatgtaaagcaaacagtccatttatgaaacaatg 458
Query: 120 taaatattttctgtgtaaatagacctacagacacatgaaatcaatatacatacttggaga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 taaatattttctgtgtaaatagacctacagacacatgaaatcaatatacatacttggaga 398
Query: 180 gaatcgtggcatccaggagcagacgtatacgacagtaaatgtaagtcaacttattgcacc 239
|||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 397 gaattgtggcatccagaagcagacatatacgacagtaaatgtaagtcaacttattgcacc 338
Query: 240 tactgctagaaaataagtttgtgtaagcataaagctgcacataaaagacatgcttaa 296
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 337 tactgctagaaaataagtttgtgttagcataaagctgcacataaaagacatgcttaa 281
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
