Query= MSMg01no513_l15.b1 MSMg01no513_l15.b1 CHROMAT_FILE:
MSMg01no513_l15.b1 PHD_FILE: MSMg01no513_l15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:19 2005
(663 letters)
>mm_chr11_82173364_82174426
Length = 1063
Score = 1261 bits (652), Expect = 0.0
Identities = 658/660 (99%)
Strand = Plus / Plus
Query: 4 ggaattcagccatacgtttgcataggagcttcctagcagccaatgcaaaaggagaaatcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagccatacgtttgcataggagcttcctagcagccaatgcaaaaggagaaatcc 263
Query: 64 ttggagttataaaatgtagggacgagaaaacaaaggtgtcacttgagatacacaagtcat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttggagttataaaatgtagggacgagaaaacaaaggtgtcacttgagatacacaagtcat 323
Query: 124 cctgctctgggaccccagagaatttcctctccacccacatccaaagaaaattccctagag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctgctctgggaccccagagaatttcctctccacccacatccaaagaaaattccctagag 383
Query: 184 ctagggatatggatggtgaccctgtgtgtggttttctgttcaacacttgtaaacttcaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctagggatatggatggtgaccctgtgtgtggttttctgttcaacacttgtaaacttcaac 443
Query: 244 ttgttcaaaagttcaaaatttttgtctccgtttagaggccgaccatggctccaggcactc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgttcaaaagttcaaaatttttgtctccgtttagaggccgaccatggctccaggcactc 503
Query: 304 caggatttacctatttgcctcctacaggattataatattctgaattgtgccttcaggaag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 caggatttacctatttgcctcctacaggattataatattctgaattgtgccttcaggaag 563
Query: 364 cagcaaatgcacagaacatagcacatagtaggtcctccataaatgttggctgatggacat 423
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 564 cagcaaatgcacagaacatagcacgtagtaggtcctccataaatgttggctgatggacat 623
Query: 424 ttaaccctgggggactaaaatggtcgtatgagcaaccactagaaagaactgacgagcacc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttaaccctgggggactaaaatggtcgtatgagcaaccactagaaagaactgacgagcacc 683
Query: 484 taagatgctggctcagagctgaggacacatccaacagataaccacgggcactggggacat 543
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 684 taagatgctggctcagagctgaggacacatccaacagataaccgcgggcactggggacat 743
Query: 544 cttaaccggtgtccattggcaaaaattactcgagaatttcacctatgtctattggcttct 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cttaaccggtgtccattggcaaaaattactcgagaatttcacctatgtctattggcttct 803
Query: 604 gcccctgggaacacagaattcagaggagttgtagtagcaaggtttgaactttaactgact 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gcccctgggaacacagaattcagaggagttgtagtagcaaggtttgaactttaactgact 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_l15.g1 MSMg01no513_l15.g1 CHROMAT_FILE:
MSMg01no513_l15.g1 PHD_FILE: MSMg01no513_l15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:20 2005
(310 letters)
>mm_chr11_82330834_82331543
Length = 710
Score = 532 bits (275), Expect = e-155
Identities = 291/297 (97%), Gaps = 3/297 (1%)
Strand = Plus / Minus
Query: 1 tttggctgcagcttcctgctctgcaggtgcatgttggcttctggaatggaaatcaaaaca 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 461 tttggctgcagcttcctgctctgcaggtgcatgtcggcttctggaatggaaatcaaaaca 402
Query: 61 gccctggtccagggatgggaaacctgagtgagtccctatgcaccatggttctcctccctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gccctggtccagggatgggaaacctgagtgagtccctatgcaccatggttctcctccctc 342
Query: 121 cccacaagccactgactccaactaacatctcagtaccaaagttctcagacacctccctgt 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 341 cccacaagccactgactccaaccaacatctcagtaccaaagttctcagacacctccctgt 282
Query: 181 aaagatacactgaataatgcatgtctttaccagtgctggagtgagggaggtcgggagggt 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 281 aaagatacactgaataatgcatgtcttaaccagtgctggagtgagggaggtcgggagggt 222
Query: 241 gggaggtaggacctgtaaaactgtgtgtgtgtgtgtgt--gtgtgtgtg-tgtgtgt 294
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 221 gggaggtaggacctgtaaaactgtgtgtgtgtgtgtgtaagtgtgtgtgatgtgtgt 165
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
