Query= MSMg01no515_c14.b1 MSMg01no515_c14.b1 CHROMAT_FILE:
MSMg01no515_c14.b1 PHD_FILE: MSMg01no515_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:21 2005
(422 letters)
>mm_chr11_78820069_78820890
Length = 822
Score = 766 bits (396), Expect = 0.0
Identities = 405/408 (99%), Gaps = 2/408 (0%)
Strand = Plus / Plus
Query: 5 gaattcagggttg-tttcgccaaaaatcgtccgtatgtgtgtatgtgtggccagcagtga 63
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagggttgcttt-gccaaaaatcgtccgtatgtgtgtatgtgtggccagcagtga 263
Query: 64 gcaaacccaaacttgagtttgtaataaagagaccctaatgtgattacatcgtaaacagct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcaaacccaaacttgagtttgtaataaagagaccctaatgtgattacatcgtaaacagct 323
Query: 124 ctttggtggtcttttggggttcacaagcgctttgtggcacagcaacaaaagtgtgttcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctttggtggtcttttggggttcacaagcgctttgtggcacagcaacaaaagtgtgttcaa 383
Query: 184 aaggattttaattaagaaaaaaggtacaaacctaaattccaggaagacaccttaaacttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaggattttaattaagaaaaaaggtacaaacctaaattccaggaagacaccttaaacttg 443
Query: 244 atgctcttagctttgggctggagtaagcatagactgtgagattcatcactgggaaacact 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atgctcttagctttgggctggagtaagcatagactgtgagattcatcactgggaaacact 503
Query: 304 ctgtctacaggaaggcccaggccagggcactttgcgtaggaacttggtgaaataaactct 363
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctgtttacaggaaggcccaggccagggcactttgcgtaggaacttggtgaaataaactct 563
Query: 364 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 411
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 83
Number of extensions: 39
Number of successful extensions: 39
Number of sequences better than 10.0: 1
Number of HSP's gapped: 38
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_c14.g1 MSMg01no515_c14.g1 CHROMAT_FILE:
MSMg01no515_c14.g1 PHD_FILE: MSMg01no515_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:21 2005
(671 letters)
>mm_chr11_79001155_79002225
Length = 1071
Score = 1280 bits (662), Expect = 0.0
Identities = 668/670 (99%)
Strand = Plus / Minus
Query: 1 tccccaggtctgccaggaatgccctacaaccccccataatcagatctaaatctgatggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 tccccaggtctgccaggaatgccctacaaccccccataatcagatctaaatctgatggag 811
Query: 61 gttgggcagggcctgcctcaggcctcctgccaggatccccaaagggcgggaaacaagttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gttgggcagggcctgcctcaggcctcctgccaggatccccaaagggcgggaaacaagttg 751
Query: 121 gcatggaaattacagtgtgctgttagtcggagcatgagtaagggcgagatcggtgccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 gcatggaaattacagtgtgctgttagtcggagcatgagtaagggcgagatcggtgccaaa 691
Query: 181 agtttctgctcaaagcaacatgggaatctgggagaaaaaccctgggctggaagccaggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 agtttctgctcaaagcaacatgggaatctgggagaaaaaccctgggctggaagccaggga 631
Query: 241 gacagaggagtccctgacgtagggcatctacagcccagttgcaggtgactgaaacacaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gacagaggagtccctgacgtagggcatctacagcccagttgcaggtgactgaaacacaac 571
Query: 301 tcactccagattaaggagaaaaggatgatgttggcctataggactaagaagggcatgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tcactccagattaaggagaaaaggatgatgttggcctataggactaagaagggcatgaag 511
Query: 361 aatggaccgttcctgaaggaggctccatgctcatctctgcttctccctgcatgcagactc 420
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 510 aatggaccgttcctgaaggaggctccatgttcatctctgcttctccccgcatgcagactc 451
Query: 421 tccccttcctccattagtaacggagagtctttattgctaaggtgggagttatgatttccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tccccttcctccattagtaacggagagtctttattgctaaggtgggagttatgatttccc 391
Query: 481 agcattccctgcatataggaatgtccattgaaatataagtggcaactttggacgagggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 agcattccctgcatataggaatgtccattgaaatataagtggcaactttggacgagggct 331
Query: 541 tctagaatgttctttaaaggtcttgcatacccttgcctcttagctcctttttctgtctac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tctagaatgttctttaaaggtcttgcatacccttgcctcttagctcctttttctgtctac 271
Query: 601 atcatggatttgaggattggtcctaagacagccatctggagtcaaagaaaatcacattgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atcatggatttgaggattggtcctaagacagccatctggagtcaaagaaaatcacattgg 211
Query: 661 gctaaaaaaa 670
||||||||||
Sbjct: 210 gctaaaaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
