Query= MSMg01no515_h01.b1 MSMg01no515_h01.b1 CHROMAT_FILE:
MSMg01no515_h01.b1 PHD_FILE: MSMg01no515_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:45 2005
(638 letters)
>mm_chr11_103092176_103093213
Length = 1038
Score = 1203 bits (622), Expect = 0.0
Identities = 634/638 (99%)
Strand = Plus / Minus
Query: 1 tgtttctgtgtgactgtttttcatgcagtcagcactgtggccctgatacctgacaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 tgtttctgtgtgactgtttttcatgcagtcagcactgtggccctgatacctgacaccagg 779
Query: 61 ggactatacatgggttatgctcatttcccaagggctggtcccactgggcctgggcaccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ggactatacatgggttatgctcatttcccaagggctggtcccactgggcctgggcaccac 719
Query: 121 cactgagagcattgttagcttctatgcatagaattccaagggttccccagcccgcacccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 cactgagagcattgttagcttctatgcatagaattccaagggttccccagcccgcacccc 659
Query: 181 tcaccctgacacaggggcctctgggtctttcaggtacgactcgaggtgtttcgggcagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 658 tcaccctgacacaggggcctctgggtctttcaggtacgactcgaggtgtttcgggtagag 599
Query: 241 gaactagtggcctgtgctggtctgagctcgcccagaatcgtccctctctatggagctgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gaactagtggcctgtgctggtctgagctcgcccagaatcgtccctctctatggagctgtg 539
Query: 301 agagaaggcccgtgggtgaacatcttcatggaattgctagaaggtgaggagacaggtccc 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 538 agagaaggcccgtgggtgaacatcttcatggaactgctagaaggtgaggagacaggtccc 479
Query: 361 gtctttatccctctcaaggttcaaggccaagaggtaacccccacttagacccttgcctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gtctttatccctctcaaggttcaaggccaagaggtaacccccacttagacccttgcctct 419
Query: 421 caggccacgtcggacctcttagccctgctcccttacctcacctgcccttcgctcttgccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 caggccacgtcggacctcttagccctgctcccttacctcacctgcccttcgctcttgccc 359
Query: 481 tcggcctgcgtggaggcctgggaaagccccactaagactgactgttctttccctaggtgg 540
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tcggcctgcgtgtaggcctgggaaagccccactaagactgactgttctttccctaggtgg 299
Query: 541 ctcgctgggtcagctcataaagcaaaagggctgtctgccagaagaccgagccctttacta 600
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 298 ctcgctgggtcagctcataaagcaaatgggctgtctgccagaagaccgagccctttacta 239
Query: 601 cctgggccaggccctggaggggctggagtacctccaca 638
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 cctgggccaggccctggaggggctggagtacctccaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_h01.g1 MSMg01no515_h01.g1 CHROMAT_FILE:
MSMg01no515_h01.g1 PHD_FILE: MSMg01no515_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:45 2005
(671 letters)
>mm_chr11_102899841_102900911
Length = 1071
Score = 1251 bits (647), Expect = 0.0
Identities = 667/677 (98%), Gaps = 6/677 (0%)
Strand = Plus / Plus
Query: 1 agtttgccaggctcgcacgccagggacttttcccttgctaagccatctcagcagctctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 agtttgccaggctcgcacgccagggacttttcccttgctaagccatctcagcagctctga 254
Query: 61 agatgacatttcctaatggcttttcttctgccctgaatctgtcattcttccaattcatcc 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 agatgacatttcccaatggcttttcttctgccctgaatctgtcattcttccaattcatcc 314
Query: 121 tatacttgttaggttacttattgatcacacacacacacacacacacacacacacacacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tatacttgttaggttacttattgatcacacacacacacacacacacacacacacacacac 374
Query: 181 acacacac------ggtctctgtatgtaatgtagctagctatcctgaatcttcctgcttc 234
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 acacacacacacacggtctctgtatgtaatgtagctagctatcctgaatcttcctgcttc 434
Query: 235 tgcctcccaagtgctaagaataaagtaaggcacccagccttacttaagttgatcagtttt 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tgcctcccaagtgctaagaataaagtaaggcacccagccttacttaagttgatcagtttt 494
Query: 295 gctttacagtgtgattagtgggctggcgggagagctcatgagttaatagcacttgctcct 354
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 495 gctttacagtgtgattagtgggctggcgggagagctcatgagttaacagcacttgctcct 554
Query: 355 ctgcagaggacttgggttcggttcccagcacctgcatgttgattcaaactacatataact 414
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ccgcagaggacttgggttcggttcccagcacctgcatgttgattcaaactacatataact 614
Query: 415 ccagtcccagggaatctgacaccctcttctgacctccataggcaccaggcacataggtgc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ccagtcccagggaatctgacaccctcttctgacctccataggcaccaggcacataggtgc 674
Query: 475 acagacacatgcagataagacacttctccatacagaataaataaacctttaaacaggtct 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 acagacacatgcagataagacacttctccatacagaataaataaacctttaaacaggtct 734
Query: 535 agactgggcctttctgcatgagcacccatctcagtttccgtagcggatgcttcctgcctg 594
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 agactgggcctttctgcatgagcacccatctcagtttccgtagcggatgcttcctgcctc 794
Query: 595 ccaaggacagattccatctcattctctgctttgtgttttggaccaaaaggacccagctaa 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ccaaggacagattccatctcattctctgctttgtgttttggaccaaaaggacccagctaa 854
Query: 655 actttggtttgctgtag 671
|||||||||||||||||
Sbjct: 855 actttggtttgctgtag 871
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
