NNNAATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCTTTCCTCTCGCCACTTTTCCATTGTCCTTTTCTCAGAAT
AAGCTCCTGGGGAAATTCTCACTCATTTGGGATCCATCGTTTCAATGGTT
TGTGATTCAGATAGAAACACAGGCATCTCCTCAGAATATCTTCCTTTCTG
CCAGGTTACTTACAGTGCCTGTAAAGTTATCACCAAGACCAGTTGTGTTG
CACCTGCTACTTCTCAGAAGGCTTAAATGGCTCTTCAAAGCTCTTTGGAG
GAATGCACAGTGCTGCAAAGACTGTGGCTGACAGTTTGTTATAGCATGTC
TCCAAAGCCGTGCCTCTCTTATTGGGTTCTGTGCTGTACACTATTCAGTA
AAAGCATGCTCACAGCACCATCTTTGCTCAAAGATGATTCTGAATACTCT
CCCACACTAGAGCAAGGGTGAACTGAAGTCTCGTTAACCTAGTCAATTGA
ACACACTGTTCTTTGAGTTTCCCTAATCTTCTCTGTATGGACAATTGCTC
CCTCTGGGTGACTCTCCTAGTGTTTTGCAATTGTAAATTGTTTCTCTGTG
AGTGTTCCTCTGTACTAAAGAAGTGATTGATGAAGAGGAAAACTGCTCTT
GCACTTTGTTGTGCTAAATTTTATGATCTCTGTGGATTACAGCATATGCT
ATTTGAAATCATTTATCAATGCTTATTTTCTCACAATTCCAGTGTAGCAT
AGATAN

NNNCCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAGTATATGTTTTGAATAGA
ACCAGAGGTATGTCTCACAAATCTCCTAGATGACTCTTATTTCAATCAAC
TTAATCATCACAACTAATAAACAGAAAGTAAAAGAACATCAAAAAGATGA
CACACTACAATCAAGGGGAGTTTATCAAAGAAGCACAAGAATGCTTTAAT
ACAGAGAAATCAATGCCTATAAAATAGTTCACCAGCCATCTGAAAGACAA
AATCTATAGACACTCTAAATAAACTTTTAAAAAGCATCTGAAAAAGTTTA
ACATCCTTTTCTGATGAGTCCTGTAGTGTGGGGAGCGGGTGTGGCGGCAG
TCCCAAAGGTGCCAGGGACTGCAGCTAAGTCATATGACTTGCACCTGACT
TCCACATATAAGACACAAACATCTTGAGTGCTGCGCAGGTGTACCACGAT
ACAGGTGAATCCAATTTGGTGGAGATTTGCCCCTGCTGCCCTGATTAGCT
GAAGTCTCATGACTGGCGAGGGGGCGTGGCCTGCGGTGCATGGATGAGAG
AGAGTATAAAAGGAGTGAGAGGCCCAGGGTTCCGGGGAGATATAAACAAG
AAGAATCAGGACTGAATAAACTGCTGTTAGAAGGACTGGTGGTCGCGTTG
TTCTTGCTGGTCGAGAGTGGGCGCAACACTGTAGCAACCAAGTCACAGTA
GAAA

Query= MSMg01no516_f14.b1 MSMg01no516_f14.b1 CHROMAT_FILE:
MSMg01no516_f14.b1 PHD_FILE: MSMg01no516_f14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:02 2005
         (683 letters)



>mm_chr11_10034485_10035569
          Length = 1085

 Score = 1236 bits (639), Expect = 0.0
 Identities = 670/681 (98%), Gaps = 2/681 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctttcctctcgccacttttccattgtccttttctcagaataagctcctgggga 64
           |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 205 gaattctctttcctcttgccacttttccattgtccttttctcagaataaactcctgggga 264

                                                                       
Query: 65  aattctcactcatttgggatccatcgtttcaatggtttgtgattcagatagaaacacagg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aattctcactcatttgggatccatcgtttcaatggtttgtgattcagatagaaacacagg 324

                                                                       
Query: 125 catctcctcagaatatcttcctttctgccaggttacttacagtgcctgtaaagttatcac 184
           ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 catctcctcagaatatcttgctttctgccaggctacttacagtgcctgtaaagttatcac 384

                                                                       
Query: 185 caagaccagttgtgttgcacctgctacttctcagaaggcttaaatggctcttcaaagctc 244
           |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caagaccagttgtgatgcacttgctacttctcagaaggcttaaatggctcttcaaagctc 444

                                                                       
Query: 245 tttggaggaatgcacagtgctgcaaagactgtggctgaca--gtttgttatagcatgtct 302
           ||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 445 tttggaggagtgcacagtgctgcaaagactgtggctgacacagtttgttatagcatgtct 504

                                                                       
Query: 303 ccaaagccgtgcctctcttattgggttctgtgctgtacactattcagtaaaagcatgctc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccaaagccgtgcctctcttattgggttctgtgctgtacactattcagtaaaagcatgctc 564

                                                                       
Query: 363 acagcaccatctttgctcaaagatgattctgaatactctcccacactagagcaagggtga 422
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acagcatcatctttgctcaaagatgattctgaatactctcccacactagagcaagggtga 624

                                                                       
Query: 423 actgaagtctcgttaacctagtcaattgaacacactgttctttgagtttccctaatcttc 482
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 actgaagtctcgttaacccagtcaattgaacacactgttctttgagtttccctaatcttc 684

                                                                       
Query: 483 tctgtatggacaattgctccctctgggtgactctcctagtgttttgcaattgtaaattgt 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tctgtatggacaattgctccctctgggtgactctcctagtgttttgcaattgtaaattgt 744

                                                                       
Query: 543 ttctctgtgagtgttcctctgtactaaagaagtgattgatgaagaggaaaactgctcttg 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttctctgtgagtgttcctctgtactaaagaagtgattgatgaagaggaaaactgctcttg 804

                                                                       
Query: 603 cactttgttgtgctaaattttatgatctctgtggattacagcatatgctatttgaaatca 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cactttgttgtgctaaattttatgatctctgtggattacagcatatgctatttgaaatca 864

                                
Query: 663 tttatcaatgcttattttctc 683
           |||||||||||||||||||||
Sbjct: 865 tttatcaatgcttattttctc 885


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1085
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1075
Effective search space:   723475
Effective search space used:   723475
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)