Query= MSMg01no520_e14.b1 MSMg01no520_e14.b1 CHROMAT_FILE:
MSMg01no520_e14.b1 PHD_FILE: MSMg01no520_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:17 2005
(718 letters)
>mm_chr11_26614258_26615375
Length = 1118
Score = 1265 bits (654), Expect = 0.0
Identities = 673/682 (98%), Gaps = 6/682 (0%)
Strand = Plus / Minus
Query: 5 gaattcatttttgttgttgtttgtatgtatatggtttcaaggctgaccactctatattat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gaattcatttttgttgttgtttgtatgtatatggtttcaaggctgaccactctatattat 619
Query: 65 acaaccataaagggagttcatccctgagaaaggctaattctccttttttt--cccctgca 122
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 618 acaaccataaagggagttcatccctgagaaaggctaattctccttttttttccccctgca 559
Query: 123 gtcattagttttgttttgttttgctttgttttttaatgagtcaaggaaataaaatactaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtcattagttttgttttgttttgctttgttttttaatgagtcaaggaaataaaatactaa 499
Query: 183 ggacctaatacaaatatgataagaggcagtttacaaagaagagatgcaactggagtagtt 242
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ggacctaatacaaatatgatgagaggcagtttacaaagaagagatgcaactggagtagtt 439
Query: 243 tgtagtacataaaacaccatgtctgtagtgcgagcatgtgaacagcatcactctagagag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgtagtacataaaacaccatgtctgtagtgcgagcatgtgaacagcatcactctagagag 379
Query: 303 atgcctacctataaaaagaaatctggggccgatgaggtgcctcaggagtaaggctcttgt 362
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 378 atgcctacctataaaaagaaatctggggccgatgaggtgtctcaggagtaaggctcttgt 319
Query: 363 atcaaccatagtgacctgagtttaaccactgtgactcacacggtaaaaagagagaacata 422
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atcaatcatagtgacctgagtttaaccactgtgactcacacggtaaaaagagagaacata 259
Query: 423 ttcatgcaacttgtcctccattttccacatgtaccaaggcaaatgcacacacaaacacac 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttcatgcaacttgtcctccattttccacatgtaccaaggcaaatgcacacacaaacacac 199
Query: 483 acaataacatacacataccatgcccacagagagacacacaccaaattaattaatataata 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 acaataacatacacataccatgcccacagagagacacacaccaaattaattaatataata 139
Query: 543 aaaatatttttaaggaaacctggatcatattcgtatagtgagttgctcttgtgataaact 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 aaaatatttttaaggaaacctggatcatattcgtatagtgagttgctcttgtgataaact 79
Query: 603 attttaataaataaaaatatatgttcaaattaagaagaatattgacttatcagaactgct 662
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atttt----aataaaaatatatgttcaaattaagaagaatattgacttatcagaactgct 23
Query: 663 gtagtggtaattaatctcaatc 684
||||||||||||||||||||||
Sbjct: 22 gtagtggtaattaatctcaatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 718
Length of database: 1118
Length adjustment: 10
Effective length of query: 708
Effective length of database: 1108
Effective search space: 784464
Effective search space used: 784464
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no520_e14.g1 MSMg01no520_e14.g1 CHROMAT_FILE:
MSMg01no520_e14.g1 PHD_FILE: MSMg01no520_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:17 2005
(677 letters)
>mm_chr11_26582515_26583592
Length = 1078
Score = 1257 bits (650), Expect = 0.0
Identities = 671/678 (98%), Gaps = 1/678 (0%)
Strand = Plus / Plus
Query: 1 attcccttgattctaatttcttttttctaatgctaattttgtttcttcttgatgcaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcccttgattctaatttcttttttctaatgctaattttgtttcttcttgatgcaacta 260
Query: 61 ttaatttttaacaccttcttactcatttctttgacgattttaaaaatagatttttcttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatttttaacaccttcttactcatttctttgacgattttaaaaatagatttttcttgt 320
Query: 121 tcagttaaactccattttgcctccatttgattcctgtttctgctttataaaaacactctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagttaaactccattttgcctccatttgattcctgtttctgctttataaaaacactctt 380
Query: 181 cttaagtctttctggtacactaaataaagattttgcataatatgttttgtgtagcaagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttaagtctttctggtacactaaataaagattttgcataatatgttttgtgtagcaagta 440
Query: 241 ttttcactgatatactttaattctgagttttcatggaatggtacttttaccttatgctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttcactgatatactttaattctgagttttcatggaatggtacttttaccttatgctgc 500
Query: 301 attaattttaaatatatttagataatatgtaaatatagcctgtatataacatatatttac 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attatttttaaatatatttagataatatgtaaatatagcctgtatataacatatatttac 560
Query: 361 aaatatctttgtcattcaaattggaaatttgtgtgtgtatttatatctttacttccctaa 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 aaatatctttgtcattcaaattggaaatttgtgtgtgtatctatatctttacttccctaa 620
Query: 421 ctgaaaatgttagctttaatataatttgttccaagttctgtctatggtttgaaagtcagt 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgtaaatgttagctttaatataatttgttccaagttctgtctatggtttgaaagtcagt 680
Query: 481 attttttatctttatctccatctacactatccatgaggtaagtgattaactgagtttttt 540
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 681 atttattatctttatctccatctacactgtccatgaggtaagtgattaactgagtttttt 740
Query: 541 t-ctagtttcaatttcaatgtctctattctggaggacgaaattaagtctttaattactag 599
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttctagtttcaatttcaatgtctctattctggaggacgaaattaagtctttaattactag 800
Query: 600 agaattttctatgtgttggtattcatgggaagaaagagctgacagcatttctctgccttg 659
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 801 agaattttctatgtgttggtattcatgggaaggaagagctgacagcatttctctgccttg 860
Query: 660 tgaatgcaaagtgcaaag 677
||||||||||||||||||
Sbjct: 861 tgaatgcaaagtgcaaag 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1078
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1068
Effective search space: 712356
Effective search space used: 712356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
