NTTTCGGAAANNNNNNCNCCCNNNNNNCCCCCCCCCNNNTTTCCCCCCNC
CCCNCCCCCCCCCCCCCCCCGTTTTCCCCCCCCCCCCCCCCCCCCCCCCC
CCNNNNNNNNATCCCCCCNTCTAAAAAAACAANAATCCCCCCCCCCCCCC
CNNNCCCCTCCCCCCCCCCCCCCNNNNNNNNNNNNCCCCCCCCCCCCCCC
CTTTTTTTTTTTTTTATACCACCATCTACAANCATGAANATGCTAACCAA
NTTCACAAAACACCTTCANCTANNANAGGGAAAGTCCACCTGATCCATAN
NAAANATATGAAATTACTGTCCTGTGTGTAGCAAACACCTCCAAAACACA
CCATCNNATTNNNNANNCCCCCAAACACAATNCCCCCGAACCTTACTAAC
AGCTCGTCTGCAAAACCCACCCANTTCTGNCTNGAAGCTCACCCTCAGGA
CCAGAAGAAACCCTTCCCCCCCCCCCTTTTACAATCTTAAACCCCACAAT
TTTTTAATCCCTCAACCCTTANNNNNNNNNNNNNNNNNNNTNNNAAAAAA
AAANNNNNNNNNNNNNNNAAAANNNNCTAAAAAAACACCGGAATCCGGGG
GGGGNNNNNNNNNNNNNNNNNNGNNGGGGACGGCGGGCAGCGCNAAGGGG
ATCGNTNCNTNNNNNNNNNNNGGGGTCGCCCAACGCTGNNNNNNTNTTTN
NNNNNNNNNTNNTNTTNTNNTTNNNNNNNNNNTNNNNNNNNTNNNNNNNN
TTTTTNNNTCTGTTTTTTTTTTNNTTTTTTNNTTNTTNNNTTTNNTTNNN
NNNNNTTAAAATAANNTTTTTTGGGGGGTGGTGGGTGGTGGGGGTGGCGG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTATTAGTTTATTATTGAATTGACATT
TCTCCACTCTGAAGACAAATGGTTCACAAACTACCTTTAAAACATCAAAA
AAAAATTGTCATGTGAAGACTCAAAAATACTTGTGACTTCTTTATGCTTG
ACATAGATCTCAACAATATTGGGGCAAAACATCAAGTATATTTAATGCTT
ATGAGACAAAGTCATTCCCATGGATAACTAGCATTTCTTATGCTGACATG
TTTTTCTTGAAAATACAGTGAAGCAGGTAGGAAATTATCAAAAATACTTG
CCATTAAAAATTATCCTAATTTTTGTTAATTCCTGACTACTTCCTAAAGA
GGCATGCATTTCACCAGTATTGTGTTTGACCAAAAGTAATGGCCATTCAC
AATATCCATTTGAATGACTCAAATAGTTTTCAAATGTACATACTATAAAA
TATTATTGTTCTGAGATTGGAGGTCACATTGAACACGCCACACAGGATTC
ATTTGCATATTTACAGAGGTATAAAGCACACAAAATTGTGCAGATAATGT
GTTGAAGTCTAAATTTTAACATACACTTAGTTTCATACAAGGCAGTAGGA
TACAACAAGTTCTGGACAAAGAACAACCAATAATCAGCCAGGTTACTACG
TACACATCANGCAGGAAGCAATCAAACAATGCGTAATACAATAGCAACTA
AATTACTATTTCTATGAAAC

Query= MSMg01no520_f03.g1 MSMg01no520_f03.g1 CHROMAT_FILE:
MSMg01no520_f03.g1 PHD_FILE: MSMg01no520_f03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:20 2005
         (627 letters)



>mm_chr11_89248059_89249085
          Length = 1027

 Score = 1212 bits (627), Expect = 0.0
 Identities = 627/627 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tattagtttattattgaattgacatttctccactctgaagacaaatggttcacaaactac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattagtttattattgaattgacatttctccactctgaagacaaatggttcacaaactac 260

                                                                       
Query: 61  ctttaaaacatcaaaaaaaaattgtcatgtgaagactcaaaaatacttgtgacttcttta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttaaaacatcaaaaaaaaattgtcatgtgaagactcaaaaatacttgtgacttcttta 320

                                                                       
Query: 121 tgcttgacatagatctcaacaatattggggcaaaacatcaagtatatttaatgcttatga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcttgacatagatctcaacaatattggggcaaaacatcaagtatatttaatgcttatga 380

                                                                       
Query: 181 gacaaagtcattcccatggataactagcatttcttatgctgacatgtttttcttgaaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacaaagtcattcccatggataactagcatttcttatgctgacatgtttttcttgaaaat 440

                                                                       
Query: 241 acagtgaagcaggtaggaaattatcaaaaatacttgccattaaaaattatcctaattttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagtgaagcaggtaggaaattatcaaaaatacttgccattaaaaattatcctaattttt 500

                                                                       
Query: 301 gttaattcctgactacttcctaaagaggcatgcatttcaccagtattgtgtttgaccaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttaattcctgactacttcctaaagaggcatgcatttcaccagtattgtgtttgaccaaa 560

                                                                       
Query: 361 agtaatggccattcacaatatccatttgaatgactcaaatagttttcaaatgtacatact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtaatggccattcacaatatccatttgaatgactcaaatagttttcaaatgtacatact 620

                                                                       
Query: 421 ataaaatattattgttctgagattggaggtcacattgaacacgccacacaggattcattt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataaaatattattgttctgagattggaggtcacattgaacacgccacacaggattcattt 680

                                                                       
Query: 481 gcatatttacagaggtataaagcacacaaaattgtgcagataatgtgttgaagtctaaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcatatttacagaggtataaagcacacaaaattgtgcagataatgtgttgaagtctaaat 740

                                                                       
Query: 541 tttaacatacacttagtttcatacaaggcagtaggatacaacaagttctggacaaagaac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttaacatacacttagtttcatacaaggcagtaggatacaacaagttctggacaaagaac 800

                                      
Query: 601 aaccaataatcagccaggttactacgt 627
           |||||||||||||||||||||||||||
Sbjct: 801 aaccaataatcagccaggttactacgt 827


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)