Query= MSMg01no520_o20.b1 MSMg01no520_o20.b1 CHROMAT_FILE:
MSMg01no520_o20.b1 PHD_FILE: MSMg01no520_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:06 2005
(663 letters)
>mm_chr11_59511758_59512820
Length = 1063
Score = 1201 bits (621), Expect = 0.0
Identities = 649/659 (98%), Gaps = 2/659 (0%)
Strand = Plus / Plus
Query: 5 gaattcattattctatttgtttggtttgggcaccagcacagattgccgctgctcctaaat 64
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 205 gaattcattattctatttgtttggtttgggcaccagcacagactgccgctgctcctaaat 264
Query: 65 cctcctgtcagtctctgagagttgagccagatatgctgacaccttgtggtccatattatt 124
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||
Sbjct: 265 cctcctgtcagtctctgagagttgagccaggtatgctgacaccttgtgggccatagtatt 324
Query: 125 gaatatattagtttgctttttgttgatgcaatgaagaccatgatcaaaaacaacttgggg 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggatatattagtttgctttttgttgatgcaatgaagaccatgatcaaaaacaacttgggg 384
Query: 185 aaaaagtgtttatttggctgtaggtattggtcatagtccaccattgagggaaaacaaaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaaagtgtttatttggctgtaggtattggtcatagtccaccattgagggaaaacaaaca 444
Query: 245 tggaagttaatcaggcccggaacctggaggtaggaattaaagcagagatcaatgagaaac 304
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggaagttaatcagggccggaacctggaggtaggaattaaagcagagatcaatgagaaac 504
Query: 305 actgcttactgatttgatgccagttttctcttttatacagtcaaagaccacctgccaggg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 actgcttactgatttgatgccagttttctcttttatacagtcaaagaccacctgccaggg 564
Query: 365 tggcactgcccacagtgagctgggttcttccacattaatcattaattaagaaaatgcccc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tggcactgcccacagtgagctgggttcttccacattaatcattaattaagaaaatgcccc 624
Query: 425 cacagacttgcacacaggccagtttgatggaagcattttttaaaattgtggttccctctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cacagacttgcacacaggccagtttgatggaagcattttttaaaattgtggttccctctt 684
Query: 485 cttaggtgactctaccttgtatcaaattggggggaaaaaaaagagcatacaggatgtggc 544
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 685 cttaggtgactgtaccttgtatcaaattggggg--aaaaaaagagcatacaggatgtggc 742
Query: 545 taaggcaaagatgactgtgagaaacaaaaaaggaaaaaacttggcgggacatccaggtct 604
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 taaggcaaacatgactgtgagaaacaaaaaaggaaaaaacttggcgggacatccaggtct 802
Query: 605 aaacgttattgtgcatgggtcatttctagcgcatggtttactatgtagtcagttgatga 663
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 aaacgttattgtgcatgggtcatttctagcgcatggtttactatgtagtcagttgatga 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_o20.g1 MSMg01no520_o20.g1 CHROMAT_FILE:
MSMg01no520_o20.g1 PHD_FILE: MSMg01no520_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:06 2005
(668 letters)
>mm_chr11_59677987_59679054
Length = 1068
Score = 737 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Minus
Query: 1 agaaagaactctcacaacttgatacacagcaagctaatgaaaaatcaggcaaaaacttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaaagaactctcacaacttgatacacagcaagctaatgaaaaatcaggcaaaaacttga 322
Query: 61 tcacttcatttccaaacaaacagggagctgtttgcttaaaacatgtccaacatgtgatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcacttcatttccaaacaaacagggagctgtttgcttaaaacatgtccaacatgtgatat 262
Query: 121 caaagtagagaaggggagagactgtgggtaagagtttgagcagggctgggtgcacagtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaagtagagaaggggagagactgtgggtaagagtttgagcagggctgggtgcacagtgt 202
Query: 181 gattgctgatgacaccactgcctggagggacccagatggaactgacctggaagcctcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gattgctgatgacaccactgcctggagggacccagatggaactgacctggaagcctcttc 142
Query: 241 aatgagaactagttctcctgatattgcaaaggtgctgcacgagctgccgaggggggaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 aatgagaactagttctcctgatattgcaaaggtgctgcacgagctgccgaggggggaaag 82
Query: 301 cgatacctagcccttcccaggtgtaaagtctatgaactgataaagcctgataagacagcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 cgatacctagcccttcccaggtgtaaagtctatgaactgataaagcctgataagacagcg 22
Query: 361 ctagtacagcagtagcacttt 381
|||||||||||||||||||||
Sbjct: 21 ctagtacagcagtagcacttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
