Query= MSMg01no522_b15.b1 MSMg01no522_b15.b1 CHROMAT_FILE:
MSMg01no522_b15.b1 PHD_FILE: MSMg01no522_b15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:37 2005
(624 letters)
>mm_chr11_16594776_16595799
Length = 1024
Score = 870 bits (450), Expect = 0.0
Identities = 462/466 (99%)
Strand = Plus / Minus
Query: 5 gaattctaaattggagtgtgagcagatggctcagtgaataagttttgacaacctgagttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaattctaaattggagtgtgagcagatggctcagtgaataagttttgacaacctgagttt 407
Query: 65 atgtaaaaagacagatatagtagcacacatactaacaattccagtgtgcttttagtaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 atgtaaaaagacagatatagtagcacacatactaacaattccagtgtgcttttagtaaaa 347
Query: 125 gatgtgaggtagcagttgagtattggaagctttaggccagctagccgttcattcatgttc 184
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 346 gatgtgaggtagcagttgagtattggaagcttgaggccagctagccgttcattcatgttc 287
Query: 185 agcatcaaacaactgaaacttcatctcaaacaagaccaaaaagtagaggccagtactgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agcatcaaacaactgaaacttcatctcaaacaagaccaaaaagtagaggccagtactgtc 227
Query: 245 cagggatgggttgttcggttggttggttttgcttttgttttttgtttggttttgattttg 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 226 cagggatgggttgttcggttggttggttttgcttttgttttttgtttggttttggttttg 167
Query: 305 gttttggttttggttctgagaatggtgccacgcctgggtctcatgtgttggagaaggcct 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 166 gttttggttttggttctgagaatggtgccacgcctgggtctcatgtgttggagagggcct 107
Query: 365 taaatccaatcagagggtggttgctttctcctataatgtttttgtcactcttgcactagt 424
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 106 taaatccaatcagagggtggttgctttctcctataatgtttttgtcactgttgcactagt 47
Query: 425 gaagatgtcttatcggggtagtgaattagaagctggaagaggtatg 470
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 gaagatgtcttatcggggtagtgaattagaagctggaagaggtatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_b15.g1 MSMg01no522_b15.g1 CHROMAT_FILE:
MSMg01no522_b15.g1 PHD_FILE: MSMg01no522_b15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:37 2005
(593 letters)
>mm_chr11_16508490_16509482
Length = 993
Score = 973 bits (503), Expect = 0.0
Identities = 545/559 (97%), Gaps = 2/559 (0%)
Strand = Plus / Plus
Query: 1 caatatgacaagaatctgttttgcctttgtagccttaccttttctctagaaatattaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatatgacaagaatctgttttgcctttgtagccttaccttttctctagaaatattaccc 260
Query: 61 tgagctgccaaaaactgaatgagggctattttcaaacatgtgatggtttgtttatgctta 120
||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 261 tgagctgccaaaagctgaatgagggttattttcaaacatgtgatggtttgtttatgctca 320
Query: 121 gcccagagagtggcactattagaaggtgtggccctgttggagtaggtgtgccactgtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcccagagagtggcactattagaaggtgtggccctgttggagtaggtgtgccactgtggg 380
Query: 181 tgtgggcttaagaccctcatcctagctgccttgaagccagtcttccactaccagccttca 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 tgtgggcttaagaccctcatcctagctgccttgaagccagtcttccactagcagccttca 440
Query: 241 gatgaagatgtagaaccatgcctgcctggatgctgccatgctttcatcttggtgataatg 300
||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||
Sbjct: 441 gatgaagatgtagaaccatgcctgcctggatgctgccatgcttccaccttgatgataatg 500
Query: 301 gactgaacctctgaacctgtcagccagccccaattaaacgttgtcctttataagacttgc 360
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 gactgaatctctgaacctgtcagccagccccaattaaatgttgtcctttataagacttgc 560
Query: 361 cttggtcatggtgtctgttcacagcagtaacgccctaactaagaaggctcacgtgaaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 cttggtcatggtgtctgttcacagcagtaacgccctaactaagaaggctcatgtgaaaca 620
Query: 421 agaaaggaac-aaatgagtgtggaaatcatctgctcccctccaccaccacccacagccct 479
|||| ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 621 agaagggaacgaaa-gagtgtggaaatcatttgctcccctccaccaccacccacagccct 679
Query: 480 ccagccccccaccccctgctattatttgagcttcatactttttcattgatgaagaaatgt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ccagccccccaccccctgctattatttgagcttcatactttttcattgatgaagaaatgt 739
Query: 540 ttgccattgtagtcactgt 558
|||||||||||||||||||
Sbjct: 740 ttgccattgtagtcactgt 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
