Query= MSMg01no522_c11.b1 MSMg01no522_c11.b1 CHROMAT_FILE:
MSMg01no522_c11.b1 PHD_FILE: MSMg01no522_c11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:41 2005
(199 letters)
>mm_chr11_8553746_8554344
Length = 599
Score = 369 bits (191), Expect = e-107
Identities = 197/199 (98%)
Strand = Plus / Minus
Query: 1 cactgccaacccagccctgctccaggcagactgggtcagttcttggtgccaggatgagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cactgccaacccagccctgctccaggcagactgggtcagttcttggtgccaggatgagct 340
Query: 61 gggagggtgagtgtggctgagctgacagagacttttgtctgactatgatctctattgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gggagggtgagtgtggctgagctgacagagacttttgtctgactatgatctctattgtcc 280
Query: 121 tgtgtccctttaacctctggaattaccgtctggcctttcgttgtttccgccacgttctgc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 cgtgtccctttaacctctggaattaccgtctggcctttcgttgtttccgccacgttctgc 220
Query: 181 ccgttgtcagaaccacgtg 199
|||| ||||||||||||||
Sbjct: 219 ccgtcgtcagaaccacgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no522_c11.g1 MSMg01no522_c11.g1 CHROMAT_FILE:
MSMg01no522_c11.g1 PHD_FILE: MSMg01no522_c11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:41 2005
(587 letters)
>mm_chr11_8363712_8364699
Length = 988
Score = 1087 bits (562), Expect = 0.0
Identities = 583/590 (98%), Gaps = 5/590 (0%)
Strand = Plus / Plus
Query: 1 tgtcccgaaggaggaatgagcccacaccctccaaagaggcacaccctccagagcaacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtcccgaaggaggaatgagcccacaccctccaaagaggcacaccctccagagcaacagt 260
Query: 61 gctccttgccctctgtcctggtccagtctccaccccc-agcccctgctgatgatgccgaa 119
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 gctccttgccctctgtcctggtccagtctccaccccccagcccctgctgatgatgccgaa 320
Query: 120 cttcccaggcagcctaggt-cacagtgacagcacacactgtgacttcatcagcagggcca 178
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcccaggcagcctag-tacacagtgacagcacacactgtgacttcatcagcagggcca 379
Query: 179 agaaggagggttaaccccaccccccaggggtcacctagtcagggcctccaattcactgag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agaaggagggttaaccccaccccccaggggtcacctagtcagggcctccaattcactgag 439
Query: 239 tccctagtccaagggctgcagtctccatgctgccaaccttcatgcccaccacagctccct 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tccctagtccaagggctgcagtctccatgctgccaaccttcatgcccaccacagctccct 499
Query: 299 gtgcccttccttagcctcctctctccaacccgag-ctgcccaaccacctcagcagcacag 357
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 500 gtgcccttccttagcctcctctctccaaccc-aggctgcccaaccacctcagcagcacag 558
Query: 358 gctgacatcggtgtgcccgctcatcaccagcacatctgggttttcttaccacgatttatg 417
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gctgacatcggtgtgcctgctcatcaccagcacatctgggttttcttaccacgatttatg 618
Query: 418 ctctcttctcacccagggtgaaggtttgctcacaagccccatgtcttgggtgtgttttaa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctctcttctcacccagggtgaaggtttgctcacaagccccatgtcttgggtgtgttttaa 678
Query: 478 aagagcccaaaccaagagtgccagaaagaaaactcttccaaagtgatctgatactcttca 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aagagcccaaaccaagagtgccagaaagaaaactcttccaaagtgatctgatactcttca 738
Query: 538 ggaaggagaacgatccaacacttgtctctgaaagtgagcgactgagagag 587
||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ggaaggagaaccatccaacacttgtctctgaaagtgagcgactgagagag 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 988
Length adjustment: 10
Effective length of query: 577
Effective length of database: 978
Effective search space: 564306
Effective search space used: 564306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
