Query= MSMg01no523_g15.b1 MSMg01no523_g15.b1 CHROMAT_FILE:
MSMg01no523_g15.b1 PHD_FILE: MSMg01no523_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:19 2005
(467 letters)
>mm_chr11_118394766_118395632
Length = 867
Score = 880 bits (455), Expect = 0.0
Identities = 464/467 (99%)
Strand = Plus / Plus
Query: 1 tagtaagcacagtcagtggaaaccagacaaagcaagaggttgggcctggaaggtgagctc 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 tagtaagcacagtcagtggaaaccagacaaagcaggaggttgggcctggaaggtgagctc 260
Query: 61 agctgggcaccgaggtgggggacttcatctactttgccagttgccttcagaagaaagaga 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctgggcaccggggtgggggacttcatctactttgccagttgccttcagaagaaagaga 320
Query: 121 gccacaggaagatcagcagcaggatacctgcctgcgctctgcaggggtctgccctaggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccacaggaagatcagcagcaggatacctgcctgcgctctgcaggggtctgccctaggca 380
Query: 181 gctaactcagaaactaactacatcacaggacaccagggcaagatttctctttccattggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctaactcagaaactaactacatcacaggacaccagggcaagatttctctttccattggc 440
Query: 241 tcagtgagggtgaacagggtgcctgaaatcacgcagcaaatcaccggagagaggctggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagtgagggtgaacagggtgcctgaaatcacgcagcaaatcaccggagagaggctggtg 500
Query: 301 cttcggtggtgctggacattcaggtgccccaaagccacagccagagtcaggctgctcgga 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttggtggtgctggacattcaggtgccccaaagccacagccagagtcaggctgctcgga 560
Query: 361 gcctgagtcttaagtggctgaggattccccagacagatggttggggatgaagtggtttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcctgagtcttaagtggctgaggattccccagacagatggttggggatgaagtggtttct 620
Query: 421 gaacaggtaaattacccccagccccaggcagtttgcagactggatgt 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaacaggtaaattacccccagccccaggcagtttgcagactggatgt 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_g15.g1 MSMg01no523_g15.g1 CHROMAT_FILE:
MSMg01no523_g15.g1 PHD_FILE: MSMg01no523_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:19 2005
(488 letters)
>mm_chr11_118565852_118566738
Length = 887
Score = 683 bits (353), Expect = 0.0
Identities = 373/383 (97%), Gaps = 7/383 (1%)
Strand = Plus / Minus
Query: 109 tattggtactggctctcagctcactttcttgttttattctgttggcgaccctggtccgtg 168
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 887 tattggtactggctctcagctcactttcttgttttattctgttggtgaccctggtccgtg 828
Query: 169 ggatgctgttgctcacatttggggtgggtcttctcgcctcagccaaacctctctggaaac 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 ggatgctgttgctcacatttggggtgggtcttctcgcctcagccaaacctctctggaaac 768
Query: 229 actctcatagacacacgggctggtgtgtttccctggtgattccaaaccccattaagttgg 288
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 accctcatagacacacgggctggtgtgtttccctggtgattccaaaccccattaagttgg 708
Query: 289 ccaagaaggttgagcctcacggctcctttcccatggtaccttgtgcccattattggaata 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ccaagaaggttgagcctcacggctcctttcccatggtaccttgtgcccattattggaata 648
Query: 349 tttcttcttcttc---tttttttttttttaaaaaaagtgaaatggatcatgggtaatgtt 405
||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 647 tttcttcttcttctttttttttttttttt----aaagtgaaatggatcatgggtaatgtt 592
Query: 406 ccagttgacagagacatggaatcccggagtcagaatgatcccatttataaacacgagggg 465
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 591 ccagttgacagagacatggaatcccggagtcagaatgatcccatttagaaacacgagggg 532
Query: 466 tgacgtgggaagggaaaggaaga 488
|||||||||||||||||||||||
Sbjct: 531 tgacgtgggaagggaaaggaaga 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 887
Length adjustment: 10
Effective length of query: 478
Effective length of database: 877
Effective search space: 419206
Effective search space used: 419206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
