Query= MSMg01no523_l09.b1 MSMg01no523_l09.b1 CHROMAT_FILE:
MSMg01no523_l09.b1 PHD_FILE: MSMg01no523_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:43 2005
(410 letters)
>mm_chr11_62211712_62212521
Length = 810
Score = 785 bits (406), Expect = 0.0
Identities = 409/410 (99%)
Strand = Plus / Minus
Query: 1 actaggaagattgagaactactggatagatgatgaactgtgtaaatgtttttctttttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 actaggaagattgagaactactggatagatgatgaactgtgtaaatgtttttctttttcc 551
Query: 61 tttctttttgatgaggcatgttatcaggaaaataaaaatagcaggtcagacactactagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tttctttttgatgaggcatgttatcaggaaaataaaaatagcaggtcagacactactagt 491
Query: 121 tatagttgtctgtgagtttgctaattggtatagtgctaatggttagtaaaatatccaggg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 490 tatagttgtctgtgagtttgctaattggtatagtgctaatggttagtaaaatctccaggg 431
Query: 181 aaagtattcctggtgagttcatctaagggaatggctccatctctcctgttagatcaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aaagtattcctggtgagttcatctaagggaatggctccatctctcctgttagatcaagaa 371
Query: 241 caaattgtcatttgtagctgagtcatacaagccaaatgtacttctgattcaatttaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 caaattgtcatttgtagctgagtcatacaagccaaatgtacttctgattcaatttaagaa 311
Query: 301 atggaatatatttcaaagggttaggcttaccaaatcatgagttcagtttaattgttatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atggaatatatttcaaagggttaggcttaccaaatcatgagttcagtttaattgttatta 251
Query: 361 atttgctacgggtgtttaataggaacaaaaaatctgccagcgctatgatc 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atttgctacgggtgtttaataggaacaaaaaatctgccagcgctatgatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_l09.g1 MSMg01no523_l09.g1 CHROMAT_FILE:
MSMg01no523_l09.g1 PHD_FILE: MSMg01no523_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:43 2005
(319 letters)
>mm_chr11_62045582_62046299
Length = 718
Score = 609 bits (315), Expect = e-179
Identities = 318/319 (99%), Gaps = 1/319 (0%)
Strand = Plus / Plus
Query: 1 tcgggatacgaaaccagacagaagatccgtatctggtgacggagtcctcactggtttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcgggatacgaaaccagacagaagatccgtatctggtgacggagtcctcactggtttaaa 260
Query: 61 gtgtcagctgtgagaggacatagggtaagagtgcaaatcttgtccccacatcagaactag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtcagctgtgagaggacatagggtaagagtgcaaatcttgtccccacatcagaactag 320
Query: 121 ataacactatcgaatctgctcagtcatttgccagcacatttagatagtagtgagacaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataacactatcgaatctgctcagtcatttgccagcacatttagatagtagtgagacaagg 380
Query: 181 aggtctaaaagttactcttaaacaatgtaagaaatatataaccccccctccaaaaaaaat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 aggtctaaaagttactcttaaacaatgtaagaaatatataaccccccctccaaaaaaa-t 439
Query: 241 catagaacagcccaaaactgcaacaccgacaagccagaaagaaacagaaaaaacaaaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 catagaacagcccaaaactgcaacaccgacaagccagaaagaaacagaaaaaacaaaaac 499
Query: 301 taaaacaaaaacaaaaaca 319
|||||||||||||||||||
Sbjct: 500 taaaacaaaaacaaaaaca 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 718
Length adjustment: 9
Effective length of query: 310
Effective length of database: 709
Effective search space: 219790
Effective search space used: 219790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
