Query= MSMg01no524_l11.b1 MSMg01no524_l11.b1 CHROMAT_FILE:
MSMg01no524_l11.b1 PHD_FILE: MSMg01no524_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:04 2005
(592 letters)
>mm_chr11_106207652_106208643
Length = 992
Score = 1116 bits (577), Expect = 0.0
Identities = 586/589 (99%)
Strand = Plus / Plus
Query: 4 ggaattccataggactgatttctgtcattgaaggaagtcacagcttccttcttggacctg 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccataggacagatttctgtcattgaaggaagtcacagcttccttcttggacctg 263
Query: 64 gtcattcatttctcccttcttttcctgacatagaaaccagatgttcagcattcccctttg 123
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 264 gtcattcatttctcccttcttttcctgacatggaaaccagatgttcagcattcccctttg 323
Query: 124 aaagccctcctgaatactgaagatgctgaagaggaaggcgtttagtgaactccatcagtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaagccctcctgaatactgaagatgctgaagaggaaggcgtttagtgaactccatcagtg 383
Query: 184 ctgcgtgtctcacaggtctccagtgcacgaaagggctctggactatcgaggaccaccata 243
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 384 ctgcgtgtctcacaggtctccagtgcacgaaagagctctggactatcgaggaccaccata 443
Query: 244 cttcctagcataaggactgagtgagctgtgtctctcctccacagcctgcttgccgtccct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cttcctagcataaggactgagtgagctgtgtctctcctccacagcctgcttgccgtccct 503
Query: 304 ttgggataatctgtcctccctgagtaagctgtttacaggttctgtctatgctttctgatg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttgggataatctgtcctccctgagtaagctgtttacaggttctgtctatgctttctgatg 563
Query: 364 ctggggataaacccaggacctcacaatgcaaagcaagaagaaatcaaccactgagttaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctggggataaacccaggacctcacaatgcaaagcaagaagaaatcaaccactgagttaca 623
Query: 424 cctcctgctctctgcaggtagtgtgtgcataaatgtatataagcatgcatatatacatac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cctcctgctctctgcaggtagtgtgtgcataaatgtatataagcatgcatatatacatac 683
Query: 484 atatgcatgtatatagtgtttgagactgagagtctatatagagcacaggaccgtctcacg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atatgcatgtatatagtgtttgagactgagagtctatatagagcacaggaccgtctcacg 743
Query: 544 attggaatcatttggtctctctggtgctaggattgcaggtgtggaccca 592
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 attggaatcatttggtctctctggtgctaggattgcaggtgtggaccca 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_l11.g1 MSMg01no524_l11.g1 CHROMAT_FILE:
MSMg01no524_l11.g1 PHD_FILE: MSMg01no524_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:04 2005
(501 letters)
>mm_chr11_106372851_106373750
Length = 900
Score = 880 bits (455), Expect = 0.0
Identities = 476/483 (98%), Gaps = 2/483 (0%)
Strand = Plus / Minus
Query: 1 attaaaaagaagatcgaagaagtctctaatacaccactgctgctaactgtggaagtgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attaaaaagaagatcgaagaagtctctaatacaccactgctgctaactgtggaagtgcaa 422
Query: 61 gagtgtcgagggaccttggcggtcaacatccccccaccaccgactgaccggatatggtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagtgtcgagggaccttggcggtcaacatccccccaccaccgactgaccggatatggtgc 362
Query: 121 gtatattccctaagtgatccctttaccacgtgactataaaagtcccagtctacttaaccc 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 361 gtatattccctaagtgatccctttaccacgtgactat-aaagtcccagtctacttaaccc 303
Query: 181 tggacaagagcatttgcacactgtttttagtagactcctgtcaatcattaatcattgtgt 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tggacaagagcatttgcccactgtttttagtagactcctgtcaatcattaatcattgtgt 243
Query: 241 tttcgtccatgactgtctcttgtactttttttttgtttgtttttttggttttttttgaga 300
||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 242 ttttgtccatgactgtctcttgtactttttgtttgtttgtttttttgg-tttttttgaga 184
Query: 301 cagggtttctctgtgtagccctggctgtcctggaactcactttgtagaccaggctggcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cagggtttctctgtgtagccctggctgtcctggaactcactttgtagaccaggctggcct 124
Query: 361 cgaactcagaagtccgcctgtctctgtctcccaagtactgggattaaaggcgtgtgccac 420
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 123 cgaactcagaaatccgcctgtctctgtctcccaagtgctgggattaaaggcgtgtgccac 64
Query: 421 caccacccagctctcttgtacatttttaagggtgatcttcatatgttaggaagagttaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 caccacccagctctcttgtacatttttaagggtgatcttcatatgttaggaagagttaag 4
Query: 481 gtg 483
|||
Sbjct: 3 gtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 900
Length adjustment: 10
Effective length of query: 491
Effective length of database: 890
Effective search space: 436990
Effective search space used: 436990
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
