Query= MSMg01no524_n19.b1 MSMg01no524_n19.b1 CHROMAT_FILE:
MSMg01no524_n19.b1 PHD_FILE: MSMg01no524_n19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:15 2005
(625 letters)
>mm_chr11_38594635_38595659
Length = 1025
Score = 1139 bits (589), Expect = 0.0
Identities = 613/621 (98%), Gaps = 2/621 (0%)
Strand = Plus / Minus
Query: 5 gaattcctattgtaagcagatttattgctgacagccaaatgataattcccagcaacctga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 719 gaattcctattgtaagcagatttattgctgacagccaaatgataattcccagcaacccga 660
Query: 65 cttgacatatgaaaactttgaaagataatacagataaacatttctcttacatttaaatta 124
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 659 cttgacatatgaaaactttgaaagataatacagataaacatatctcttgcatttaaatta 600
Query: 125 ttatgtatgtttaaaagagaaaacagaatgagcatttgagg-tgttgataaatatatatc 183
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 599 ttatgtatgtttaaaagagaaaacagaatgagcatttg-ggatgttgataaatatatatc 541
Query: 184 tggatgtgcaatctagtaattaggtacaactctctgtttctgacattgcttgatagaaat 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tggatgtgcaatctagtaattaggtacaactctctgtttctgacattgcttgatagaaag 481
Query: 244 tctaaatgaagacacagagggcaaattttcttatttgaattgtcttcttaaaaacctgac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tctaaatgaagacacagagggcaaattttcttatttgaattgtcttcttaaaaacctgac 421
Query: 304 cgccccttgaaaaattaatgtttatatgtgaacctaagaagcaagtgtttggtcactgtt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cgccccttgaaaaattaatgtttatatgtgaacctaagaagcaagtgtttggtcactgtt 361
Query: 364 caatgcatttataataaagattcttcatgttggtatgtaccctgatattcttctgtttgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 caatgcatttataataaagattcttcatgttggtatgtaccctgatattcttctgtttgt 301
Query: 424 gttttttaacctcaattatttagaataaaattgatataaaattagtcatgatgatacata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gttttttaacctcaattatttagaataaaattgatataaaattagtcatgatgatacata 241
Query: 484 tcctgtaatcttagcatgtgtgaactagagacagtgtgtcctagcttgctttatttttgc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tcctgtaatcttagcatgtgtgaactagagacagtgtgtcctagcttgctttatttttgc 181
Query: 544 ttttataaacaccatgaccaaaaggaactatgggaggaaatgatttattggggtatagtt 603
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ttttgtaaacaccatgaccaaaaggaactatgggaggaaatgatttattggggtatagtt 121
Query: 604 caggttgcagcacatcattga 624
||||||||||||||||||||
Sbjct: 120 taggttgcagcacatcattga 100
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_n19.g1 MSMg01no524_n19.g1 CHROMAT_FILE:
MSMg01no524_n19.g1 PHD_FILE: MSMg01no524_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:15 2005
(497 letters)
>mm_chr11_38413969_38414865
Length = 897
Score = 899 bits (465), Expect = 0.0
Identities = 489/497 (98%)
Strand = Plus / Plus
Query: 1 tgagcattttaacaaatgaaagccataaccaaatattttcagtttaaaaatacttttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagcattttaacaaatgaaagccataaccaaatattttcagtttaaaaatacttttctc 260
Query: 61 aatatcttgagatatatattattaatgtatttatttccttatatttcataagcacacatg 120
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 aatatcttgagatatataatattaatgtatttatttctttatatttcataagcacacatg 320
Query: 121 cacatttatatttaccaaacccaataagcaaacatttttgtacatctatatatccactta 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 aacatttatttttaccaaacccaataagcaaacatttttgtacatctatatatccattta 380
Query: 181 gtcatctacgtgggtacacgggtaatctgattttactcactcaaatagaaacatagttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcatctacgtgggtacacgggtaatctgattttactcactcaaatagaaacatagttta 440
Query: 241 gcgctatttcactgttgatcattccaagcctcctcctgtcaatcaaggagcttttcttca 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 gcgctatttcactgttgatcattccaagcctcctcctgtcaatcagggagcttttcttca 500
Query: 301 cattcctgccattctgtcccctctgttcctcggcccctttgctccatctttctgcctgcc 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cattcctgccattctgtcctctctgttcctcggcccctttgctccatctttctgcctgcc 560
Query: 361 ttttacactaacactcacgaaaaccttcttttaaatgtttactaaagctactatcagacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttacactaacactcacgaaaaccttcttttaaatgtttactaaagctactatcagacc 620
Query: 421 atgtttcttcccgagtgttaaatcaacacttcccactacatctccgtttttgactgctga 480
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgtttcttcccaagtgttaaatcaacacttcccactacatctccgtttttgactgctga 680
Query: 481 gtttaacactgggagga 497
|||||||||||||||||
Sbjct: 681 gtttaacactgggagga 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
