Query= MSMg01no525_k10.b1 MSMg01no525_k10.b1 CHROMAT_FILE:
MSMg01no525_k10.b1 PHD_FILE: MSMg01no525_k10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:20 2005
(490 letters)
>mm_chr11_106475784_106476673
Length = 890
Score = 932 bits (482), Expect = 0.0
Identities = 488/490 (99%), Gaps = 1/490 (0%)
Strand = Plus / Plus
Query: 1 ctagtgtcccagacacctgtgtgacccagaagtctttgccctggatttggaggccagccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagtgtcccagacacctgtgtgacccagaagtctttgccctggatttggaggccagccc 260
Query: 61 ttgtattagtcaagtttcactgggagaatagaatggatgtcagagatacagaaaacaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtattagtcaagtttcactgggagaatagaatggatgtcagagatacagaaaacaatg 320
Query: 121 gggatttatcagattggcttacacaatacagtcagagaagctcaggccatgaggttggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggatttatcagattggcttacacaatacagtcagagaagctcaggccatgaggttggat 380
Query: 181 gaatcagtaggccctgtctttcatcaaagggctgagggattctcggtgagaaactggtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatcagtaggccctgtctttcatcaaagggctgagggattctcggtgagaaactggtct 440
Query: 241 tcagtccgtgttgaaaattcaaagacattgggtcctgatgtcggtgaaggatcccagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagtccgtgttgaaaattcaaagacattgggtcctgatgtcggtgaaggatcccagcag 500
Query: 301 cagaaagagcattcaccatcaagaggccaagacaggcaggcaaaccgcataaactattcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagaaagagcattcaccatcaagaggccaagacaggcaggcaaaccgcataaactattcc 560
Query: 361 ctcagaccccctccaatctcagcctctgcagaaggttccccacaatctaatcaagaagat 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcagaccccctccgatctcagcctctgcagaaggttccccacaatctaatcaagaagat 620
Query: 421 ccctcagggactgggagagatggctcagcggttaagagcgctgactgctcttccaaaggt 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccctcagggactgg-agagatggctcagcggttaagagcgctgactgctcttccaaaggt 679
Query: 481 cctgagttca 490
||||||||||
Sbjct: 680 cctgagttca 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_k10.g1 MSMg01no525_k10.g1 CHROMAT_FILE:
MSMg01no525_k10.g1 PHD_FILE: MSMg01no525_k10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:20 2005
(392 letters)
>mm_chr11_106636647_106637433
Length = 787
Score = 696 bits (360), Expect = 0.0
Identities = 382/392 (97%), Gaps = 5/392 (1%)
Strand = Plus / Minus
Query: 1 actttcagctcagtcggacctacagctcatggcaatcctcttagtttagacgggattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 actttcagctcagtcggacctacagctcatggcaatcctcttagtttagacgggattaaa 702
Query: 61 ggtgtgaatctccagcccctccagttcgtttgtttgcagtttattgcgatcctggatata 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 701 ggtgtgaatctccagcccctccagttcgtttgtttgcagtttattgcggtcctggatata 642
Query: 121 aactggaaagccttgcttgtgctgggcattcactctgctgagctacactctcaggatgct 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aactggaaagccttgcgtgtgctgggcattcactctgctgagctacactctcaggatgct 582
Query: 181 agacgtaacttgtaatagcagatccaacacataccagtggatatcagtgttctcctggta 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 581 agacgtaacttgtaatagcagatccgacacataccagtggatatcagtgttctcctggta 522
Query: 241 cagatgtgctgagcgctgttaccgtacctgagcctttatgtttgagacttaacttacttt 300
||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 521 cagatgtgctgagtgctgttactgtacctgagcctttatgtttgag-----acttacttt 467
Query: 301 caacctgttgctggataaaagtctcaggcaaccttaattctcagagagacctgtggaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 caacctgttgctggataaaagtctcaggcaaccttaattctcagagagacctgtggaatt 407
Query: 361 agaagtcagtgaatcccagcattcaaagagca 392
||||||||||||||||||||||||||||||||
Sbjct: 406 agaagtcagtgaatcccagcattcaaagagca 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 787
Length adjustment: 9
Effective length of query: 383
Effective length of database: 778
Effective search space: 297974
Effective search space used: 297974
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
