Query= MSMg01no526_d05.b1 MSMg01no526_d05.b1 CHROMAT_FILE:
MSMg01no526_d05.b1 PHD_FILE: MSMg01no526_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:03 2005
(516 letters)
>mm_chr11_25898829_25899743
Length = 915
Score = 948 bits (490), Expect = 0.0
Identities = 499/502 (99%), Gaps = 1/502 (0%)
Strand = Plus / Minus
Query: 15 gaattcataaataaatggatggcttttgaagctgagcaaggtttgtagatgaaattcaat 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gaattcataaataaatggatggcttttgaagctgagcaaggtttgtagatgaaattcaat 656
Query: 75 gatgctaatgaacatgactgactggagaaaaaaaaaagatgtataaactagctgttttcc 134
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 655 gatgctaatgaacatgactgactggag-aaaaaaaaagatgtttaaactagctgttttcc 597
Query: 135 gtctagaaagcatagtgtctaggctgactaaaactaaaactaacagcaaataaccagtac 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gtctagaaagcatagtgtctaggctgactaaaactaaaactaacagcaaataaccagtac 537
Query: 195 ctgtgtgtgaagtgactggacagaaaaggcttttaatttttgttcacatatagctaagag 254
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 536 ctgtgtgtgaagtgactggacagaaaaggcttttaatttttgttcacatatagccaagag 477
Query: 255 cactcacagatggtcaaacagcatactctgtacagatgtggggcatggttaggtttcatg 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cactcacagatggtcaaacagcatactctgtacagatgtggggcatggttaggtttcatg 417
Query: 315 attttctaagcacatccgatctctcttcatgcttgagtttgagtggttgtagtcttctgg 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 attttctaagcacatccgatctctcttcatgcttgagtttgagtggttgtagtcttctgg 357
Query: 375 ttagcaatgtagactatatggaccctgatttggttagctatcttccatattcaaaatctt 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttagcaatgtagactatatggaccctgatttggttagctatcttccatattcaaaatctt 297
Query: 435 acctgctatttagcaatatctaggaagaagctagtgagaaacatggaatcacaaacctta 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 acctgctatttagcaatatctaggaagaagctagtgagaaacatggaatcacaaacctta 237
Query: 495 cactggacctattccctcagag 516
||||||||||||||||||||||
Sbjct: 236 cactggacctattccctcagag 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 915
Length adjustment: 10
Effective length of query: 506
Effective length of database: 905
Effective search space: 457930
Effective search space used: 457930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_d05.g1 MSMg01no526_d05.g1 CHROMAT_FILE:
MSMg01no526_d05.g1 PHD_FILE: MSMg01no526_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:03 2005
(253 letters)
>mm_chr11_25721410_25722062
Length = 653
Score = 482 bits (249), Expect = e-140
Identities = 252/253 (99%)
Strand = Plus / Plus
Query: 1 actccatatcagtttggttgacagagttccaaagatcaggtggacaaatggccttctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actccatatcagtttggttgacagagttccaaagatcaggtggacaaatggccttctttc 260
Query: 61 caactaccactttcctgggatctgatattgctaatttcaaggggcgcttgccaaagtagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caactaccactttcctgggatctgatattgctaatttcaaggggcgcttgccaaagtagc 320
Query: 121 tcacaacacactggctatgatttatgcaagacgtgggagaacttccttctctctaagtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcacaacacactggctatgatttatgcaagacgtgggagaacttccttctctctaagtgt 380
Query: 181 ctagtgattagtaaaatatcaattcatcttactctgaattattttgatcaaggctgttga 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 ctagtgattagtaaaatatcaattcatcttattctgaattattttgatcaaggctgttga 440
Query: 241 gagacactataaa 253
|||||||||||||
Sbjct: 441 gagacactataaa 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
