Query= MSMg01no526_f22.b1 MSMg01no526_f22.b1 CHROMAT_FILE:
MSMg01no526_f22.b1 PHD_FILE: MSMg01no526_f22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:16 2005
(422 letters)
>mm_chr11_85579787_85580609
Length = 823
Score = 791 bits (409), Expect = 0.0
Identities = 417/421 (99%), Gaps = 3/421 (0%)
Strand = Plus / Plus
Query: 5 gaattcctttgtctcctctctcctgtgaggagacgtgttactgattgtggttcccaccca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttgtctcctctctcctgtgaggagacgtgttactgattgtggttcccaccca 264
Query: 65 tccggccaagcctccaccatcttcttaggagtgaaattgtactttggccactattgggct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccggccaagcctccaccatcttcttaggagtgaaattgtactttggccactattgggct 324
Query: 125 gtgacagttcttcagaactgaggcttggccaagaagcgggctcactctccctcccactcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgacagttcttcagaactgaggcttggccaagaagcgggctcactctccctcccactcc 384
Query: 185 ctgttcctttccttccctcctgcctccacttcatttcaaacaaatgagttgtgtttgtgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgttcctttccttccctcctgcctccacttcatttcaaacaaatgagttgtgtttgtgg 444
Query: 245 gttttttaatgaggtttttccagcctcttgggttttttgtccttgaccataaagaacacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttttttaatgaggtttttccagcctcttgggttttttgtccttgaccataaagaacacc 504
Query: 305 cagttactcaaagctggaaataaatttggccagaagtaagcgttggtgctgatattttta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagttactcaaagctggaaataaatttggccagaagtaagcgttggtgctgatattttta 564
Query: 365 aacctttttttttttcagggggagaggggagcatggaagaaa---gggggggggcggggg 421
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 565 aaccttttttttttccagggggagaggggagcatggaagaaaagggggggggggcggggg 624
Query: 422 g 422
|
Sbjct: 625 g 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 823
Length adjustment: 9
Effective length of query: 413
Effective length of database: 814
Effective search space: 336182
Effective search space used: 336182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_f22.g1 MSMg01no526_f22.g1 CHROMAT_FILE:
MSMg01no526_f22.g1 PHD_FILE: MSMg01no526_f22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:16 2005
(587 letters)
>mm_chr11_85733335_85734321
Length = 987
Score = 841 bits (435), Expect = 0.0
Identities = 467/493 (94%), Gaps = 24/493 (4%)
Strand = Plus / Minus
Query: 1 tataattaccttacttttcttttgtttgtttgttttttgttatatttgtaattgcagggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tataattaccttacttttcttttgtttgtttgttttttgttatatttgtaattgcagggg 410
Query: 61 tgcttgtgtgctttttgtaacagaaagatggatgagaactctgaaatgggtcctttctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tgcttgtgtgctttttgtaacagaaagatggatgagaactctgaaatgggtcctttctgc 350
Query: 121 atcatctacctctgactcgtgctcgttcatgtggatgccacgcccacaaaagtgcatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atcatctacctctgactcgtgctcgttcatgtggatgccacgcccacaaaagtgcatgtg 290
Query: 181 cgcacacataggtctgatctgggttctgtgctgtataaaaatgggagaccacatcatcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 cgcacacataggtctgatctgggttctgtgctgtataaaaatgggagaccacatcatcac 230
Query: 241 tcacttttttcacctaagaaaagaagcccagccaggcagtggtggtgcatgcctttaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tcacttttttcacctaagaaaagaagcccagccaggcagtggtggtgcatgcctttaatc 170
Query: 301 ccaacacttgggaggcagaggcagaggcagaggcagaggcagaggcagaggcagaggcag 360
||| ||||||| |||||||||||||||||||||||||
Sbjct: 169 ccagcacttgg------------------------gaggcagaggcagaggcagaggcag 134
Query: 361 aggcagaggcagaggcagaggcagaggcagaggcagaggcagaggcagaggcaggcagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aggcagaggcagaggcagaggcagaggcagaggcagaggcagaggcagaggcaggcagat 74
Query: 421 ttttgagttctacagcctcagcctggtctacagagtgagttccaggacagccagggctgc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 73 ttttgagttctacagcctcagcctggtctacagagtgagttccaggacagccagggctac 14
Query: 481 acagagaaaccca 493
|||||||||||||
Sbjct: 13 acagagaaaccca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 84
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
