Query= MSMg01no527_c16.b1 MSMg01no527_c16.b1 CHROMAT_FILE:
MSMg01no527_c16.b1 PHD_FILE: MSMg01no527_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:19 2005
(630 letters)
>mm_chr11_88840652_88841681
Length = 1030
Score = 1106 bits (572), Expect = 0.0
Identities = 618/646 (95%), Gaps = 22/646 (3%)
Strand = Plus / Plus
Query: 1 agataccattgtcttccaaagaaggaaggaaaaa----------------aaggaaggaa 44
|||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 185 agataccattgtcttccaaagaaggaaggaaaaaaaggaaggaaggaaggaaggaaggaa 244
Query: 45 ggaaggaaggaaggaaggagaaagaaagaaagtggaaagcgtcttgtgtagctctttgag 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggaaggaaggaaggaaggagaaagaaagaaagtggaaagcgtcttgtgtagctctttgag 304
Query: 105 gacagttaattattgtccaccactgctgtcctatactacagaggaacattagaatttagt 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gacagttaattattgtccaccactgctgtcctatactacagaggaacattagaatttagt 364
Query: 165 ctttctatcagagtgtacaggagtgtcttaccttcctccacaacctccttaggttctgat 224
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 365 ctttctatcagagtgtacaggagtgtcttaccttcccccacaacctccttaggttctgat 424
Query: 225 aactactacctattttctttttcttgtgatttttttctttttttttttttttctattttg 284
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 425 aactactacctattttctttttcttgtgattt-----tttttctttttttttctattttg 479
Query: 285 tgtgtgtgtgtgttttttttaaattgggtatttatttcatttacatttccaatgctatcc 344
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tgtgtgtgtgtgtttttttt-aattgggtatttatttcatttacatttccaatgctatcc 538
Query: 345 caaaagtcccccacatgctcacccacccacccactcccacttcttggctctgtcattcct 404
|||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 539 caaaagtctcccacatgctcccccacccacccactcccacttcttggccctgtcattcct 598
Query: 405 ctgtgatttttttcttattaagtcttcatgtaagtgaacatgtgtggcatttgtcttcct 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ctgtgatttttttcttattaagtcttcatgtaagtgaacatgtgtggcatttgtcttcct 658
Query: 465 atagcatgctgccctcccactgcctccatactaatggaaattatatacctttacagctga 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 atagcatgctgccctcccactgcctccatactaatggaaattatatacctttacagctga 718
Query: 525 gtaacatcccattatgtatatgtgcggcacattttccctacttaatactcagattcattg 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 gtaacatcccattatgtatatgtgcggcacattttccctacttaatactcagattcattg 778
Query: 585 tatgtctttactcattctaacacaaagccggacagttaatatgttc 630
||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 779 tatgtctttactcattctaacacaaagccggacggttaatatgttc 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_c16.g1 MSMg01no527_c16.g1 CHROMAT_FILE:
MSMg01no527_c16.g1 PHD_FILE: MSMg01no527_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:19 2005
(618 letters)
>mm_chr11_88967544_88968558
Length = 1015
Score = 516 bits (267), Expect = e-150
Identities = 302/315 (95%), Gaps = 5/315 (1%)
Strand = Plus / Minus
Query: 1 aaccccagatcctgagatgtctctctctgaacccttcccactgtatttattatatgaggc 60
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 338 aaccccagatcctgagatgtttctctc-gaacccttcccactgtatttattatatgaggc 280
Query: 61 caggcaggcagcaggctccggagaagatgcttcacaaagtagcgtggctaggtgcaatca 120
|||||||||||||||||||||| ||||||||||| || ||||||||||||| ||||||||
Sbjct: 279 caggcaggcagcaggctccggaaaagatgcttcataaggtagcgtggctagatgcaatca 220
Query: 121 gcaaagagagacagaaggtcccacacgctcctgagccaggcaacctgggttacaagtctc 180
|| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 219 gc--agagagacagaaggtcccacacgctcctgagccagacagcctgggttacaagtctc 162
Query: 181 acctctgacacagactagatggatggccttgggcaagtggcttaactcctgcatctctcg 240
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 acctctg--acagactagatggatggccttgggcaagtggcttaactcctgcatctctcg 104
Query: 241 gttctcggaagatcaaaatcaaataacggtagtgcccaccattgtaaagtttggtgatta 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gttctcggaggatcaaaatcaaataacggtagtgcccaccattgtaaagtttggtgatta 44
Query: 301 agacacacaaagctc 315
|||||||||||||||
Sbjct: 43 agacacacaaagctc 29
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1015
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1005
Effective search space: 611040
Effective search space used: 611040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
