Query= MSMg01no527_h15.b1 MSMg01no527_h15.b1 CHROMAT_FILE:
MSMg01no527_h15.b1 PHD_FILE: MSMg01no527_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:43 2005
(616 letters)
>mm_chr11_70334585_70335600
Length = 1016
Score = 1152 bits (596), Expect = 0.0
Identities = 610/616 (99%), Gaps = 4/616 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttttgtttcgtttgtttgtttgtttttgtttttttcgagacagggtttttctg 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcttttgttt-gtttgtttgtttgtttttgtttttttcgagacagggtttttctg 263
Query: 64 tgtagccctggaactcactctgtagaccaggctggccgagaactcagagatctgcctgcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtagccctggaactcactctgtagaccaggctggccgagaactcagagatctgcctgcc 323
Query: 124 tctgcctcccaagtgctgggattaaaggcctgtgccatcactgccaggcaggaattcaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctgcctcccaagtgctgggattaaaggcctgtgccatcactgccaggcaggaattcaat 383
Query: 184 ttttccaggttctcagatccaaaatcttgttaacgtgactttccccataccaacattgaa 243
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttttccaggttcttagatccaaaatcttgttaacgtgactttccccataccaacattgaa 443
Query: 244 tctatgaaaatttgactactccccacatttcccaagtttctttgtctaaatcagctttat 303
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctatgaaaatctgactactccccacatttcccaagtttctttgtctaaatcagctttat 503
Query: 304 gtatcatctggactatctttgcctttcttacagttgtacggtcactaaactataaaaggt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtatcatctggactatctttgcctttcttacagttgtacggtcactaaactataaaaggt 563
Query: 364 cattcttttgtttgtttgctcagttctttgtttttgtttttgagaccaggtttttt---t 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 564 cattcttttgtttgtttgctcagttctttgtttttgtttttgagaccaggttttttgttt 623
Query: 421 gtttgtttgtttgtttgttttccttgcgtagccctggtatcctggaacttgctttgcaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtttgtttgtttgtttgttttccttgcgtagccctggtatcctggaacttgctttgcaga 683
Query: 481 ccaggttggtcttgaactcacagagatctgcctgcctctgcctcctgagtgctgagatta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccaggttggtcttgaactcacagagatctgcctgcctctgcctcctgagtgctgagatta 743
Query: 541 aaggcatgtgctacaactgaccagcaaaaggtgattctttaaaatgtcagtattgggggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aaggcatgtgctacaactgaccagcaaaaggtgattctttaaaatgtcagtattgggggc 803
Query: 601 tagagaaatggcttag 616
||||||||||||||||
Sbjct: 804 tagagaaatggcttag 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_h15.g1 MSMg01no527_h15.g1 CHROMAT_FILE:
MSMg01no527_h15.g1 PHD_FILE: MSMg01no527_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:43 2005
(518 letters)
>mm_chr11_70480654_70481571
Length = 918
Score = 725 bits (375), Expect = 0.0
Identities = 384/387 (99%)
Strand = Plus / Minus
Query: 1 agtgccactttggggactcagtcctgtggaagaagcaagcttggattttgaaacaccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agtgccactttggggactcagtcctgtggaagaagcaagcttggattttgaaacaccaaa 328
Query: 61 agaaaggggaagggacatttgaagctgaggaacaggaggaagatgtgtgcccaatcacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agaaaggggaagggacatttgaagctgaggaacaggaggaagatgtgtgcccaatcacaa 268
Query: 121 gaggcagcaaccccctaccgtgggaagcgacaggcaggataaggaaccaggttaaaagta 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gaggcagcaaccccctaccatgggaagcgacaggcaggataaggaaccaggttaaaagta 208
Query: 181 gctgagcgggctggagagatggctcacggttaagaggacagagtgctcttcctgggaacc 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 207 gctgagcgggctggagagatggctcacggttaagaggacagactgctcttcctgggaacc 148
Query: 241 tgagttagatttgcagactccacatcaggttccttaccactgcctgtaaccccagctcct 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 147 tgagttagatttgcagactccacatcaggttccttacaactgcctgtaaccccagctcct 88
Query: 301 ggggggaatctgacatctcagatctctgtgggcactcggattcatacatagacgaatatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 ggggggaatctgacatctcagatctctgtgggcactcggattcatacatagacgaatatg 28
Query: 361 catagttaagataataaaaataaatct 387
|||||||||||||||||||||||||||
Sbjct: 27 catagttaagataataaaaataaatct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
