TTTATTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGG
ATCCGCGGAATTCATCATTGTCTACAAGATTTCTGATGGGCTGGTTGTCA
TTCCTCAAAGTCATACCACTGGATATTATATCTGAAGTCTGTTTGCAGTA
AATGTGGCCAGAGTGTGAGTGTCCAACTCCAAATGGGATAATGATTTACA
GTCATTACACAGGGAAAGGATTAAATTCCCACAATTCATATCATTAAACA
ATAATAATAGTGTCAGTACCTTCTCTTTCCAATAATACATCTGATTCCTC
ATGAAAGTGAAAGAGATAACTGGTGACCCCAACCATAAAATTATTCTCAT
TGCTGCTTCCTAAAGGTAATTATGCTATGATTATGAATTGTAATGTAAAT
GTCCGTGCTTTCCAGTGATCTTAGGAGACCCCAAAGGACTGCAAACCACT
GGTTGAGAACCACTGGTCCCTTACCTGGAAACTGGAGCCCTTAAATGACA
AAGATAGTATGTATTTGCTTCATTCAGCTAACACATTTTCCTTTTTAGAA
ATATCTTGATTAATAAAACTGCTAACTGACCTACCATGCTGAGTTAGTCA
CTGTTCATGAGTTTTCTCTGCATAAATACACATAAAAAATAGCCTGTGTT
CAAAATACTTCTGCTTGTAGTTCAGTTAAGCATTATCTTGGATATGCTCA
TTCTTGGCATATGCATTTCACAGAGACTCCGATTCCCTTTTCTGAACN

NTTTTTAACAATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCAA
ATGGCTGAGAAGCACCTGAAAAATGTTCAGGATCCTTAATCATCAGGGAA
ATGCAAATCAAAACAACCCTTTGATTTCACCTCACACCATTCAGAATGGC
TAAGATAAAAAAATAATGTGACAGCAGATGCTGGCAAGGATGCAGAGAAA
GAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTC
TGGAAATCAGTCTCGCAGTTCTTCAGAAAATTGGACATAGTAATAACAGA
GGATCCCACAATACCTCTCCTGGGCATATATTCAGAAGATGTTCCAACTA
GTAATAAGGACACATGTACCACTATGTTCATAGCAGCCTTATTTATAATA
GCCAGAAGCTTGAAAGAACCCAGATGTCCCTTAACAGAGGAATGGATACA
GAAAATGTGGCACATTTACACAATGGAGTACTACTCTGCTACTAAAAAGA
ATGATTTTATGAAATTTCTAGGTAAATGGATGGAGGTGGAAGGTATCATC
CTGAGTGAGGTAACCCAATCACAAAAGAACTCACATGATATATATTCACT
GATAAGTGGATATTAACCCAGAAACTTAGAATACCCAAGTTACAAGTTGC
AAAACACATGAAACTCAAGAAGAATGAAGACCCAAGTGTGGTCACTTTGC
CCN

Query= MSMg01no528_a09.b1 MSMg01no528_a09.b1 CHROMAT_FILE:
MSMg01no528_a09.b1 PHD_FILE: MSMg01no528_a09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:30 2005
         (670 letters)



>mm_chr11_92865403_92866472
          Length = 1070

 Score = 1286 bits (665), Expect = 0.0
 Identities = 668/669 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttctgatgggctggttgtcattcctcaaagtcataccactggatattatatctgaagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttctgatgggctggttgtcattcctcaaagtcataccactggatattatatctgaagt 260

                                                                       
Query: 61  ctgtttgcagtaaatgtggccagagtgtgagtgtccaactccaaatgggataatgattta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtttgcagtaaatgtggccagagtgtgagtgtccaactccaaatgggataatgattta 320

                                                                       
Query: 121 cagtcattacacagggaaaggattaaattcccacaattcatatcattaaacaataataat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtcattacacagggaaaggattaaattcccacaattcatatcattaaacaataataat 380

                                                                       
Query: 181 agtgtcagtaccttctctttccaataatacatctgattcctcatgaaagtgaaagagata 240
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgtcagtatcttctctttccaataatacatctgattcctcatgaaagtgaaagagata 440

                                                                       
Query: 241 actggtgaccccaaccataaaattattctcattgctgcttcctaaaggtaattatgctat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actggtgaccccaaccataaaattattctcattgctgcttcctaaaggtaattatgctat 500

                                                                       
Query: 301 gattatgaattgtaatgtaaatgtccgtgctttccagtgatcttaggagaccccaaagga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gattatgaattgtaatgtaaatgtccgtgctttccagtgatcttaggagaccccaaagga 560

                                                                       
Query: 361 ctgcaaaccactggttgagaaccactggtcccttacctggaaactggagcccttaaatga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgcaaaccactggttgagaaccactggtcccttacctggaaactggagcccttaaatga 620

                                                                       
Query: 421 caaagatagtatgtatttgcttcattcagctaacacattttcctttttagaaatatcttg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaagatagtatgtatttgcttcattcagctaacacattttcctttttagaaatatcttg 680

                                                                       
Query: 481 attaataaaactgctaactgacctaccatgctgagttagtcactgttcatgagttttctc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attaataaaactgctaactgacctaccatgctgagttagtcactgttcatgagttttctc 740

                                                                       
Query: 541 tgcataaatacacataaaaaatagcctgtgttcaaaatacttctgcttgtagttcagtta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgcataaatacacataaaaaatagcctgtgttcaaaatacttctgcttgtagttcagtta 800

                                                                       
Query: 601 agcattatcttggatatgctcattcttggcatatgcatttcacagagactccgattccct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agcattatcttggatatgctcattcttggcatatgcatttcacagagactccgattccct 860

                    
Query: 661 tttctgaac 669
           |||||||||
Sbjct: 861 tttctgaac 869


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space:   699600
Effective search space used:   699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)