Query= MSMg01no528_e15.b1 MSMg01no528_e15.b1 CHROMAT_FILE:
MSMg01no528_e15.b1 PHD_FILE: MSMg01no528_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:51 2005
(607 letters)
>mm_chr11_89733642_89734648
Length = 1007
Score = 1104 bits (571), Expect = 0.0
Identities = 597/611 (97%), Gaps = 10/611 (1%)
Strand = Plus / Plus
Query: 5 gaattctgcccccctcaaaaatcacatgctgagaaaagagaaaacctaaagcctgagtca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gaattctgcccccctcaaaaatcacatgctgagaaaagagaaaacctaaagcctgagtca 258
Query: 65 ggcaggtttttcttctctgggaagacttacaacttgttagatcatcttacaaaagagaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ggcaggtttttcttctctgggaagacttacaacttgttagatcatcttacaaaagagaca 318
Query: 125 gtgaagggtcattggtgggtgggcattcagtttgatggagactgcttagctatatatttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtgaagggtcattggtgggtgggcattcagtttgatggagactgcttagctatatatttc 378
Query: 185 tctggccctttacctaaatctcaaccttactttgagaccctgtagctgaccttgaaggga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tctggccctttacctaaatctcaaccttactttgagaccctgtagctgaccttgaaggga 438
Query: 245 catcactgaatctctttgtttttcttcccagagtagtcttggtctgtctgtctgtctgtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 catcactgaatctctttgtttttcttcccagagtagtcttggtctgtctgtctgtctgtc 498
Query: 305 tgtctgtctctctctctctctctctctctctctctctgtctcatttttcactaacaattt 364
||||||||| ||| ||| ||||||||||||||| | |||||||||||||||||||||||
Sbjct: 499 tgtctgtctgtctgtctgtctctctctctctctgt--gtctcatttttcactaacaattt 556
Query: 365 ggccattttaattggcttctggaggataggtgactaagccaggattcttagggccttgtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggccattttaattggcttctggaggataggtgactaagccaggattcttagggccttgtg 616
Query: 425 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt--------catttttca 476
||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 617 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcatttttca 676
Query: 477 ctaacaatttggctattttaattggcttctcgaggatagggggctaaaccaggattcttg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ctaacaatttggctattttaattggcttctcgaggatagggggctaaaccaggattcttg 736
Query: 537 ggggcacaaagctgtgaccctaagtccagtaacataatctcagcctcaaatgtcctcagt 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ggggcacaaagctgtgaccctaagtccagtaacataatctcagcctcaaatgtcctcagt 796
Query: 597 gggaggcagtg 607
|||||||||||
Sbjct: 797 gggaggcagtg 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 83
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_e15.g1 MSMg01no528_e15.g1 CHROMAT_FILE:
MSMg01no528_e15.g1 PHD_FILE: MSMg01no528_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:51 2005
(636 letters)
>mm_chr11_89890334_89891369
Length = 1036
Score = 1210 bits (626), Expect = 0.0
Identities = 634/637 (99%), Gaps = 2/637 (0%)
Strand = Plus / Minus
Query: 1 ccccttacttaaaaagcatctcctcttccttagcaataaggagccgttgcttagggggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ccccttacttaaaaagcatctcctcttccttagcaataaggagccgttgcttagggggag 777
Query: 61 ggagggtccgcagtggaaggaagcaagaaggatggccagttccaggacaaacaggtcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ggagggtccgcagtggaaggaagcaagaaggatggccagttccaggacaaacaggtcact 717
Query: 121 ggtgcaggtcccatctgtgggagcctgccgggggcgtttccactctgccattgaagtgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ggtgcaggtcccatctgtgggagcctgccgggggcgtttccactctgccattgaagtgcg 657
Query: 181 ctggcggtttctctttggggagcacacttgtgctttgcatttggggaagaactgccctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ctggcggtttctctttggggagcacacttgtgctttgcatttggggaagaactgccctca 597
Query: 241 cgtgtgtttgattattctccctccctcccactttcg-ttttgcttttgcttggtgtggtc 299
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 596 cgtgtgtttgattattctccctccctcccactttcgtttttgcttttgcttggtgtggtc 537
Query: 300 gagctggctagtttccagcatcccggaagatgccagttcctcaggctcctctctgtccaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gagctggctagtttccagcatcccggaagatgccagttcctcaggctcctctctgtccaa 477
Query: 360 tcaccacatgaagatctctgtcatcacaaaggcccgttgagttcagtgaaattcgggaag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tcaccacatgaagatctctgtcatcacaaaggcccgttgagttcagtgaaattcgggaag 417
Query: 420 ctggccagcttttctcctagctaactctttttttttttttaaagggtgtgtcaacaattt 479
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 416 ctggccagcttttctcctagctaactc-ttttttttttttaaagggtgtgtcaacaattt 358
Query: 480 tactctgaaatcaggggcattttggaaagtgatctgtgtttttgtgtgctttggggataa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tactctgaaatcaggggcattttggaaagtgatctgtgtttttgtgtgctttggggataa 298
Query: 540 caactcttgttatttcccctcccaaatatgctctaggcagttttcttttaagtagaaaga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 caactcttgttatttcccctcccaaatatgctctaggcagttttcttttaagtagaaaga 238
Query: 600 tctaacagtagtaagaggaagaagaanaaaatgtgtt 636
|||||||||||||||||||||||||| ||||||||||
Sbjct: 237 tctaacagtagtaagaggaagaagaaaaaaatgtgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
