NNNNNNTTCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCATAAACCATGAAGTTAGTAAAAATGTCCAAAGATCAGG
ATAACCTTGAGATAACAAGCAAATATTAAAAAATAATAATAGCTGCAAAA
GTTCTTTATAGTTGTGTATGTTTAATCCAGGCAGCACAGGTGTCCTCAGA
CAGAGATATTCTAAGCCTAAGAGATCAAAATTTATGAGTAAAAATATGCA
ACACACCTGAACTAACAGGAAGACTTAAACGGGCTGACCTTGGACTAGAA
GTCCTGCTCAGTGGGAAAGGAGCCTTTCATCAAACCAGAAGTCACAAATA
TGATCTCTAGAACTTGCATAGTAGGAGAGAACAAGTCCATGTAAGGTATG
ACTAAATGCACCTACACACATAGACACACACACCTACAGAATAAGTAAAC
AAGAAGTAATGGGAAGGACTACACTTTGAAAATGTCCAGTAGATTGAAAT
GACCGATAAATCTTAAATATGTTTTACTTACATAATGAAAAAAATAGAAG
CCAGTGCTACAGCATGCCACACCCAAATATCACCTGGAGAAAGATGGTCT
CCCAGGAGTGCATACATGCCTAGGAGCACAGGTAAGACCACCACTTCTGC
TCAGAAGGACCTGCCCAGAGCCCTCAGGACGCAGGAAACAAGGAACAGTC
GGGGACATGACCCATCTGGTTTCCTTCTGTGCCCAGAGCTGN

CCATAGGAGCGCCGCCCGTCCATTTACGGATTGAATTCCCGATTCCAGGG
ACTTACACTGTATGGTCTGAAAATCTTGAAGCTATGGACCTAATAGTCCA
ATATGCAAATTGTGCTTGAATCATGAGGACCAGCGCAACAAAGCGACAGA
AGAGAGAGAGAGAGAGAGAGAGACCTTCGTTTAAAAACCCCAATAATGGT
AAGCCAATTGTAAAGCCTCCGGGCCTCCCAAATTTTTTTTTCACCCAAAA
AAAGAAAATTTTCCCCCCCCCCTTTTAACCACCGGAAACCCAAAAAAAAA
CCCCCCCCCCCATTCCCCCCCAAAAANCATTTTTTTTTTAAAAAAATCAA
AAAAAAAATTGTAACAGAAAAAGGCTCCCCAAAAAATTTCTAATCTTAAC
ACCCCCCCGGGGGGGGGGGGGGGGG

Query= MSMg01no528_p06.b1 MSMg01no528_p06.b1 CHROMAT_FILE:
MSMg01no528_p06.b1 PHD_FILE: MSMg01no528_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:43 2005
         (687 letters)



>mm_chr11_25863946_25865032
          Length = 1087

 Score = 1261 bits (652), Expect = 0.0
 Identities = 676/684 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcataaaccatgaagttagtaaaaatgtccaaagatcaggataaccttgagataa 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 204 ggaattcataaaccatgaagttagtaaaaatgtccaaagatcaggataaccttgatataa 263

                                                                       
Query: 64  caagcaaatattaaaaaataataatagctgcaaaagttctttatagttgtgtatgtttaa 123
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 264 caagcaaatattaaaaaataataatagctgcaaaagttctttgtagttgtgtatgtttaa 323

                                                                       
Query: 124 tccaggcagcacaggtgtcctcagacagagatattctaagcctaagagatcaaaatttat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tccaggcagcacaggtgtcctcagacagagatattctaagcctaagagatcaaaatttat 383

                                                                       
Query: 184 gagtaaaaatatgcaacacacctgaactaacaggaagacttaaacgggctgaccttggac 243
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagtaaaaatatgcaacacaactgaactaacaggaagacttaaacgggctgaccttggac 443

                                                                       
Query: 244 tagaagtcctgctcagtgggaaaggagcctttcatcaaaccagaagtcacaaatatgatc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tagaagtcctgctcagtgggaaaggagcctttcatcaaaccagaagtcacaaatatgatc 503

                                                                       
Query: 304 tctagaacttgcatagtaggagagaacaagtccatgtaaggtatgactaaatgcacctac 363
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 504 tctagaacttgcatagtaggagagaacaagtccatgtaagctatgactaaatgcacctac 563

                                                                       
Query: 364 acacatagacacacacacctacagaataagtaaacaagaagtaatgggaaggactacact 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acacatagacacacacacctacagaataagtaaacaagaagtaatgggaaggactacact 623

                                                                       
Query: 424 ttgaaaatgtccagtagattgaaatgaccgataaatcttaaatatgttttacttacataa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttgaaaatgtccagtagattgaaatgaccgataaatcttaaatatgttttacttacataa 683

                                                                       
Query: 484 tgaaaaaaatagaagccagtgctacagcatgccacacccaaatatcacctggagaaagat 543
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 684 tgaaaaaaatagaagccagtgctacagcatgccacacccaaatatcccctggagaaagat 743

                                                                       
Query: 544 ggtctcccaggagtgcatacatgcctaggagcacaggtaagaccaccacttctgctcaga 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggtctcccaggagtgcatacatgcctaggagcacaggtaagaccaccacttctgctcaga 803

                                                                       
Query: 604 aggacctgcccagagccctcaggacgcaggaaacaaggaacagtcggggacatgacccat 663
           ||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 804 agggcctgcccagagccctcaggactcaggaaccaaggaacagtcggggacatgacccat 863

                                   
Query: 664 ctggtttccttctgtgcccagagc 687
           ||||||||||||||||||||||||
Sbjct: 864 ctggtttccttctgtgcccagagc 887


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space:   729129
Effective search space used:   729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)