NCCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCATGTTTTATAGATGTGTCTTCTGACTTAGGGTCTCTCCCTAGGC
TACAGCTAAGGCTTGGCCCCTTCTACCCAAAGGATGCAGTAATTTTTAGT
CTTGGCTTGGGAATGCCAACTTCCAAGCTCACTAACGTGGCTATTGGTCA
GAGTTATTAATTCCATGTCACTGGTACTTCCCATAGGTTTGCCCTTATTG
TGGAACCTTGAATTTCTTATAGTGAGGGAATCTGCATGTCAGAGATATCA
CACAATATAGAGGACAGGATGTTTTCTGAATAGAGAGGTCTCCCTAAACA
TTGGTGACTCTTTCTTTGTTAGAAGCAAGTTATGAAGTCTGTACCCCAGG
AAAGGGCAATGCAGAACCATGTGGATATCAGAAGTGAGGGACACTAGGAT
GCATGTGAGGGGCTAGCCACTTCATATGATGTCTATATACACCCAATCCA
ACATGGTGCTGTCACATACAGGGCAAGTGTTCAAGGGATCTGGGAAGAAG
GTGAGGAGATTCCAAAGTCCCAGAATGTCACTATCATAGAATCCTATGGT
CAAGTGACACTATTATGACCAGGCCAGCTTCATTGTACTCACTCTATCAG
GATAGAAGAGAATTTCTGCTATTTGTCACTAACCATGGACTCTATATGAT
ATGGGATATCCCTCCATACCTCCCACAAAACAATTATTCTTTCTATGTCA
GATCTCTATAGCTCTTGT

ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGTAAGAATGCTACCTATTCAGTAA
CATTCAAATTTACCTCTAGTAGAGACAGTGAAAGTAATCAGGCATCACAA
TTTACTTGAATAGAGCTAGTAATCTCAGGGCTAGTCTACATAGTAAGTAC
TTAGAACAATAGCCGAGTCACTCCCAAACACACCAATATACAATGGCCTA
GGAAAAAGGTGGGTTGTGATTTTAGGAGGAAAGAGTTAGTAGAACAGAAT
TCCCTAGGGCATGTTTTTCACTAGGCCCAGAGAAATAGCATTATCAGGTA
TTTACTAAAGGACCCCTGGTGGTGGGTTGAACAATAGACTAGCATTGCAT
CAGACCACTCAACTGGCTCCTGTGTTTAGCTGATCTTACTTAAAGGTTGT
TCCTATTCTCAGTTGCAACATTGCCTGGCTCCCCATAGCTTTTTATGTAT
GTATTTTCTTTGTTTTGTACATTGGCAGATGTATTTGCCTAGATTTCTTG
TTTTTCTTCCCTATTAAAAGTCTAGTGCTTGGCTGGGCAAAACACATTCA
GATACACACTCTCTGTGTGTCCCTGTCTGTTTGTCATCCGCTCCAAATCC
TTGCTTGCCTGTAACCAGTACCCTGAGTTTTCCTGTGGATAGAGGACTTA
ACTGAAGTCCATCTGCAGCACATTTCCCTGATGATTAANGATGTTGA

Query= MSMg01no529_i24.b1 MSMg01no529_i24.b1 CHROMAT_FILE:
MSMg01no529_i24.b1 PHD_FILE: MSMg01no529_i24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:35 2005
         (603 letters)



>mm_chr11_40120695_40121697
          Length = 1003

 Score = 1104 bits (571), Expect = 0.0
 Identities = 592/599 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatgttttatagatgtgtcttctgacttagggtctctccctaggctacagctaag 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 gaattcatgttttagagatgtgtcttctgacttagggtctctccctaggctacagctaag 918

                                                                       
Query: 65  gcttggccccttctacccaaaggatgcagtaatttttagtcttggcttgggaatgccaac 124
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 917 gcttggccccttctacccaaaggatgcagtgatttttagtcttggcttgggaatgccgac 858

                                                                       
Query: 125 ttccaagctcactaacgtggctattggtcagagttattaattccatgtcactggtacttc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 ttccaagctcactaacgtggctattggtcagagttattaattccatgtcactggtacttc 798

                                                                       
Query: 185 ccataggtttgcccttattgtggaaccttgaatttcttatagtgagggaatctgcatgtc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ccataggtttgcccttattgtggaaccttgaatttcttatagtgagggaatctgcatgtc 738

                                                                       
Query: 245 agagatatcacacaatatagaggacaggatgttttctgaatagagaggtctccctaaaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 agagatatcacacaatatagaggacaggatgttttctgaatagagaggtctccctaaaca 678

                                                                       
Query: 305 ttggtgactctttctttgttagaagcaagttatgaagtctgtaccccaggaaagggcaat 364
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 677 ttggtgactctttctttgttagaagcaagtcatgaagtctgtaccccaggaaagggcaat 618

                                                                       
Query: 365 gcagaaccatgtggatatcagaagtgagggacactaggatgcatgtgaggggctagccac 424
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gcagaagcatgtggatatcagaagtgagggacactaggatgcatgtgaggggctagccac 558

                                                                       
Query: 425 ttcatatgatgtctatatacacccaatccaacatggtgctgtcacatacagggcaagtgt 484
           ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 557 ttcatatgatgtctatatacacccagtccaacatgttgctgtcacatacagggcaagtgt 498

                                                                       
Query: 485 tcaagggatctgggaagaaggtgaggagattccaaagtcccagaatgtcactatcataga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tcaagggatctgggaagaaggtgaggagattccaaagtcccagaatgtcactatcataga 438

                                                                      
Query: 545 atcctatggtcaagtgacactattatgaccaggccagcttcattgtactcactctatca 603
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atcctatggtcaagtgacactattatgaccaggccagcttcattgtactcactctatca 379


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space:   588849
Effective search space used:   588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)