NAAAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTCTGATATGCACCTCCGCTGTGCAGAACGGTAATGTGA
GGTCTCTGGGAGCGGGTTGGGTGTCTCAGTGTGGGTGTCAATCTGAGAAC
TGGGTAGTGAAGGACAGGTTCCTGCTTCAGGGAGGAATTCAGGAGGGAGG
TACAATGCATCCTCCTAAGCCAGCTCCTGAGATCTCTTCCCTATCCTCTG
CATGCAAAGCCTCCGCCTAGAGGGCAACTGCCTGGCTCCCTGAGGCTCAC
AGTTGAGGCTGGAGGACAGAGGAATGGGATAAATAGATAATTGCTGCCTG
TCAGGGGGAGGCGATGGTGGTGCTAGAGCGGGATCCCAGCAGGCAACCAC
AGCAGAGTTATTTTAAGGAGACATGTTATTATTCAGGAAAATTGAGAGAC
CACCTCTTCCGAACTGCCAACTGCTGTGATCAGTTCATCCCCCGCCCCCA
CCCCCACCCCCACCCCCGCCTAATCTGACTGGGGACTCAGGAGAAGCAGA
GATAAACTCCTCATCTTCTTTTTCCCAAGAAGCCCAAAAAACTAGCAGGT
GTGAGTAGTGAGAGAAAAGGCTGGTTTCCTTGGCAACGTCAATGCCATCA
TCAGACTCAGTCTAGCATAACACAGCATTTACCCCCCCCCCCCAAGCCCC
TCTCCTGTCCTTTCATCCATCAGAAAGGATCGTCTCCTCTCAGGGAACAC
AAN

NTTCCATGATAATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCATGGCAGTTTTAGCACCAGA
ACAGAATTGCTAAGGCATCCAGCTTGGACCACTGAGCTCCTACCAGTTCT
CAGGCTGTGCATACAGCCATTGTTCAAATACCCGGACGGTATTAGGCAAG
CTAACCTAGTATCCTTGTAGCTTGACTTTTGGCTACTTCCTAGGTTCTTT
TTTTTTTCTTCCACCCTTTCAACCCTCTAGCACTAGGTAGGAGTGAAAAA
AGGGGAGAGGAGAAAGAGTGACGGTATCATTAGACTACTTCCTGCTGATT
AGGGGCTTCGAGGTCCTTGGGGCAAGTTTGATCTTGGCCATCAGGATATG
TAATTTCTCCTTTTCGTCTCTTCGCACATAACTACTTGATAAACCCCAAC
AAAACATGACCAACAGCATCCAACCACAAACCAGCCAACCAGAATTCCCT
CTATGAGGGTCCTAGCATTTATATACCTTCTGAAAAGTCCCTAGAATTCT
AAATTTCACACACTCACAGAAAACATCTGCAGCTGGTGAAACCACAGCCC
TGCCAAAGCATGGTCGAATCATGCTCAGCTGCTGTGGACAGCCTGAAGCA
GCCCCACACCTGGGGTTAAAATGAAACCATTACTATACTGCTTCTGTGTT
TCAAAAAGCCCAAATTCTGACTACAGACCCCCCTTGAGTATGGATCAGTT
GGTTCTATTGG

Query= MSMg01no530_c17.b1 MSMg01no530_c17.b1 CHROMAT_FILE:
MSMg01no530_c17.b1 PHD_FILE: MSMg01no530_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:23 2005
         (685 letters)



>mm_chr11_31963548_31964632
          Length = 1085

 Score = 1284 bits (664), Expect = 0.0
 Identities = 677/682 (99%), Gaps = 2/682 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttctgatatgcacctccgctgtgcagaacggtaatgtgaggtctctgggagcg 63
           ||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttctgagagggacctccgctgtgcagaacggtaatgtgaggtctctgggagcg 263

                                                                       
Query: 64  ggttgggtgtctcagtgtgggtgtcaatctgagaactgggtagtgaaggacaggttcctg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggttgggtgtctcagtgtgggtgtcaatctgagaactgggtagtgaaggacaggttcctg 323

                                                                       
Query: 124 cttcagggaggaattcaggagggaggtacaatgcatcctcctaagccagctcctgagatc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttcagggaggaattcaggagggaggtacaatgcatcctcctaagccagctcctgagatc 383

                                                                       
Query: 184 tcttccctatcctctgcatgcaaagcctccgcctagagggcaactgcctggctccctgag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcttccctatcctctgcatgcaaagcctccgcctagagggcaactgcctggctccctgag 443

                                                                       
Query: 244 gctcacagttgaggctggaggacagaggaatgggataaatagataattgctgcctgtcag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gctcacagttgaggctggaggacagaggaatgggataaatagataattgctgcctgtcag 503

                                                                       
Query: 304 ggggaggcgatggtggtgctagagcgggatcccagcaggcaaccacagcagagttatttt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggggaggcgatggtggtgctagagcgggatcccagcaggcaaccacagcagagttatttt 563

                                                                       
Query: 364 aaggagacatgttattattcaggaaaattgagagaccacctcttccgaactgccaactgc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaggagacatgttattattcaggaaaattgagagaccacctcttccgaactgccaactgc 623

                                                                       
Query: 424 tgtgatcagttcatcccccgcccccacccccacccccacccccgcctaatctgactgggg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtgatcagttcatcccccgcccccacccccacccccacccccgcctaatctgactgggg 683

                                                                       
Query: 484 actcaggagaagcagagataaactcctcatcttctttttcccaagaagcccaaaaaacta 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 actcaggagaagcagagataaactcctcatcttctttttcccaagaagcccaaaaaacta 743

                                                                       
Query: 544 gcaggtgtgagtagtgagagaaaaggctggtttccttggcaacgtcaatgccatcatcag 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gcaggtgtgagtagtgagagaaaaggctggtttccttggcaacgtcaatgccatcatcag 803

                                                                       
Query: 604 actcagtctagcataacacagcatttaccccccccccccaagcccctctcctgtcctttc 663
           |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 804 actcagtctagcataacacagcatttacccccccccc--aagcccctctcctgtcctttc 861

                                 
Query: 664 atccatcagaaaggatcgtctc 685
           ||||||||||||||||||||||
Sbjct: 862 atccatcagaaaggatcgtctc 883


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)