NACCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAATGAAGTTTCTGCGCTATTTAACAAAGTTTCTCTGTCGCTC
AGTTGCACAGGTCGAGACATGTCAGTAAGGATTTCAAGACCCTTTTCCAA
AGCTTTCTGGAATGACTCGGAAATGATGGTTGGATGTATACCTGCCATTT
ATGAACCAAGTTAATTACAACTTAACTATTTATCACTATTTTACTCATTA
AAATGTTTTACTCATTAAAATGTCAAAATAACCTAGAAATCTATTTATTT
CTACAAAAAGAAGCCTTGCAAAAATAAGAAGCAAAATAGAAATTCTTGAC
AAAAGAGTAGTTACTTCAAAATTAAACCCCACATTACTTAATAGTTTGGC
TTTTTATGTTTGCCTTTAACAATTTTTTCTCCATCATTCTTCATTAATGA
AAAGTATATTATACTCTACATACCTTTCTGCAGAAGTTTGGTACAGGAGT
CTAAAAGAGAGCCAGCAATGATGACAACCGACGTGGTGCCATCTCCTGCT
TCTATGTCTTGAGCTTTAGACAATTCCACCAGCTGTGTGAACAGAACATG
ACAAGATGCTAAGAAATGAGACCCAGTAACAGCGAACTCAGAGCATGACA
TCGATGTCACCTACACATAGCTAGAAATACATTCCTCCTGACATCTGATT
TTTACTTTACTCTAGGTTTCATTTAAAGATGAAAATCCATGTATTAATGG
CGCACAAAATTG

NCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXACAGAGATCCACCTTCCTATGCC
AATGAACTAAGCAGGGCTCAAGAAATGGCTCAGCATTAAGAGCACTGACT
GCGCTTCCAGAGGACCTAGATATGGATCCCAACACCCACATGGGGAGGCT
CATAACTGTCTCTAACTCCAGTTCCAAGGGGTACTCTTAGGCATTCCATG
CACACTAAAAAGGCAAAGCACTCAAACACATGAAGTAATCTAAATCTAAA
AAGAATGGAGGGAAGAAGACAGACAAAAGCAACCTACTGGTGAAAGAGGT
TTGGCTCACAATCTGAGGCTACTGCCCTTCATGGTGGGGGAAGTCAGGGT
ACCAGGAGCCTGAGGCAGTTGGTCACAGGACACTTGCAGTCATGAAATAA
AGAGGAACAAAGGCTTGTGCTCAGCTCTGTTCTCATTTTTGTTTAATTTT
ATTTTATGAGTGTTTTTCCCTTCATGTTTGTCTGTGTACCACACTTACGC
ATGGCACCTGAGAAAACCAGAAGAGGTCCTTGGATCCCCTAGAACTGGAG
TTCTAGATGTGAGTTCTGGGAACCGAACCCAGGTCCTCCAAAAGAGCAGC
AAGCACTCCTAACCACTGAACCATCTCTCCAACCTCTCATTTCTCCTTTT
AATACAGTCCCAGGTCCTATCACAGGGAATAGTGGGATCCACACAGATCT
TCCCACCTNCAACAATTG

Query= MSMg01no530_d13.b1 MSMg01no530_d13.b1 CHROMAT_FILE:
MSMg01no530_d13.b1 PHD_FILE: MSMg01no530_d13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:28 2005
         (645 letters)



>mm_chr11_22895422_22896465
          Length = 1044

 Score = 1183 bits (612), Expect = 0.0
 Identities = 634/646 (98%), Gaps = 10/646 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    cgctatttaacaaagtttctctgtcgctcagttgcacaggtcgagacatgtcagtaagga 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 cgctatttaacaaagtttctctgtcgctcagttgcacaggtcgagacatgtcagtaagga 954

                                                                        
Query: 61   tttcaagacccttttccaaagctttctggaatgactcggaaatgatggttggatgtatac 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953  tttcaagacccttttccaaagctttctggaatgactcggaaatgatggttggatgtatac 894

                                                                        
Query: 121  ctgccatttatgaaccaagttaattacaacttaactatttatcactattttactcattaa 180
            |||||||||||||||||||||||||||||| ||||||||||||||||||       ||||
Sbjct: 893  ctgccatttatgaaccaagttaattacaacctaactatttatcactatt-------ttaa 841

                                                                        
Query: 181  aatgttttactcattaaaatgtcaaaataacctagaaatctatttatttctacaaaaaga 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840  aatgttttactcattaaaatgtcaaaataacctagaaatctatttatttctacaaaaaga 781

                                                                        
Query: 241  agccttgcaaaaataagaagcaaaatagaaattcttgacaaaagagtagttacttcaaaa 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780  agccttgcaaaaataagaagcaaaatagaaattcttgacaaaagagtagttacttcaaaa 721

                                                                        
Query: 301  ttaaaccccacattacttaatagtttggctttttatgtttgcc-tttaacaattttttct 359
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 720  ttaaaccccacattacttaatagtttggctttttatgtttgccttttaacaattttttct 661

                                                                        
Query: 360  ccatcattcttcattaatgaaaagtatattatactctacatacctttctgcagaagtttg 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660  ccatcattcttcattaatgaaaagtatattatactctacatacctttctgcagaagtttg 601

                                                                        
Query: 420  gtacaggagtctaaaagagagccagcaatgatgacaaccgacgtggtgccatctcctgct 479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600  gtacaggagtctaaaagagagccagcaatgatgacaaccgacgtggtgccatctcctgct 541

                                                                        
Query: 480  tctatgtcttgagctttagacaattccaccagctgtgtgaacagaacatgacaagatgct 539
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540  tctatgtcttgagctttagacaattccaccagctgtgtgaacagaacatgacaagatgct 481

                                                                        
Query: 540  aagaaatgagacccagtaacagcgaactcagagcatgacatcgatgtcacctacacatag 599
            ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480  aagaaatgagaccc--taacagcgaactcagagcatgacatcgatgtcacctacacatag 423

                                                          
Query: 600  ctagaaatacattcctcctgacatctgatttttactttactctagg 645
            ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 422  ctagaaatacattcctcttgacatctgatttttactttactctagg 377


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1044
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1034
Effective search space:   656590
Effective search space used:   656590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)