Query= MSMg01no530_f01.b1 MSMg01no530_f01.b1 CHROMAT_FILE:
MSMg01no530_f01.b1 PHD_FILE: MSMg01no530_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:35 2005
(658 letters)
>mm_chr11_62272150_62273208
Length = 1059
Score = 1199 bits (620), Expect = 0.0
Identities = 645/655 (98%), Gaps = 5/655 (0%)
Strand = Plus / Plus
Query: 5 gaattccaccctagttcc--atcgaggagcagaaaagtggttgttcatcattggttccgt 62
|||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatcctag--ccaaatcgaggagcagaaaagtggttgttcatcattggttccgt 262
Query: 63 tcagtaccttcatgttcctttgggaactgcgactgtactggatgttttgggttttttata 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcagtaccttcatgttcctttgggaactgcgactgtactggatgttttgggttttttata 322
Query: 123 aagacagtctcactgtaatctagcatcccaggcgtgagccgctgtgcctgacctgttatc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aagacagtctcactgtaatctagcatcccaggcgtgagccgctgtgcctgacctgttatc 382
Query: 183 ctgaggaaccgtctatttgcaaaaggatcaaataaaatcatgcaccagacaatttgagct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctgaggaaccgtctatttgcaaaaggatcaaataaaatcatgcaccagacaatttgagct 442
Query: 243 gtatggtgtctgctcagcccaccaactttctttcctaataatagcaaaagaccttcctgc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gtatggtgtctgctcagcccaccaactttctttcctaataatagcaaaagaccttcctgc 502
Query: 303 tgctttgaaacccattttctgctacaaagattcatgtgtcaaattgggagattttt-gtt 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 503 tgctttgaaacccattttctgctacaaagattcatgtgtcaaattgggagattttttgtt 562
Query: 362 taacttcagacaaatagaaatacatttatagataattttagagttcatctgtacccaggt 421
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 563 taacttcagacaaatagaaatacatttatagataattttagagttcatctgtacccagct 622
Query: 422 attattaaaagaattcttcaaaaatgagacttgaataatgatagagacaaaaacaaaaga 481
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 623 attattaaaagaattcttcaaaaatgagacttgaataatgatacagacaaaaacaaacga 682
Query: 482 gaaaaccaggataccctaaatatggtgatgactggacaatgtgaagtgtatacatacagt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gaaaaccaggataccctaaatatggtgatgactggacaatgtgaagtgtatacatacagt 742
Query: 542 gggtgaattttatagcaaagtatacctcaataaagctgattttcaaaattgctcangacc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 743 gggtgaattttatagcaaagtatacctcaataaagctgattttcaaaattgctcaggacc 802
Query: 602 ttttttcccatgtggttgttgtgttgttctcttttggggggccaggggtgttttt 656
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ttttttcccatgtggttgttgtgttgttctcttttggggggccaggggtgttttt 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1059
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1049
Effective search space: 679752
Effective search space used: 679752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no530_f01.g1 MSMg01no530_f01.g1 CHROMAT_FILE:
MSMg01no530_f01.g1 PHD_FILE: MSMg01no530_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:35 2005
(653 letters)
>mm_chr11_62423292_62424344
Length = 1053
Score = 1139 bits (589), Expect = 0.0
Identities = 644/675 (95%), Gaps = 22/675 (3%)
Strand = Plus / Minus
Query: 1 acccagtcacagatcaaccagaaaaacacagtacccagaaaaaccaggaatgatggcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 acccagtcacagatcaaccagaaaaacacagtacccagaaaaaccaggaatgatggcaca 673
Query: 61 cgcctttaatccgagcactgaggaggcagagacaggaagatctctgtgaacttgaggcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 cgcctttaatccgagcactgaggaggcagagacaggaagatctctgtgaacttgaggcca 613
Query: 121 gcctggtcacatagtgacattaaataaattccagggcagacaggacagacccttgccaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gcctggtcacatagtgacattaaataaattccagggcagacaggacagacccttgccaga 553
Query: 181 aaaaaattatgtgtgccctgaacttggacagacttctacacagagaacccctgtctcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aaaaaattatgtgtgccctgaacttggacagacttctacacagagaacccctgtctcaaa 493
Query: 241 aagaggaggaggaggagaaaagagaaaaaggaaacaatatatagttgtcgaagggacaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aagaggaggaggaggagaaaagagaaaaaggaaacaatatatagttgtcgaagggacaca 433
Query: 301 gttcaggccgtggtactcagggtcacaaactcagatgttcatgaaagagggctggagagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gttcaggccgtggtactcagggtcacaaactcagatgttcatgaaagagggctggagagg 373
Query: 361 tagctcagcaattaaaagcactgtctgctcttgaagaggacactggttcgattcccagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tagctcagcaattaaaagcactgtctgctcttgaagaggacactggttcgattcccagca 313
Query: 421 cccacatagtagctaacaatcatctgtatctccagggattctgatgccccttcctggctt 480
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |
Sbjct: 312 cccacatagtagctaacaatcatctgtacctccagggattctgataccccttcctggcct 253
Query: 481 ctgcatccactgtatgtatatgatgcacagac-tatatatata---------tatataca 530
|||||||||||||||||||| | ||||||||| |||||||||| ||||||||
Sbjct: 252 ctgcatccactgtatgtatacggtgcacagacatatatatataatatatatatatataca 193
Query: 531 ca------------agcaaaacacctatacatgtgaaaaaagttaaatgctgatgaagca 578
|| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 catacacacacacaagcaaaacacctatacatgtgaaaaaagttaaatgctgatgaagca 133
Query: 579 aacaaattgtgtaggtggactgattgtactggtaaagacttggtcttctcagatttcttt 638
|||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 132 aacaaattgtgtaggtagactgattgcactggtaaagacttggccttctcagatttcttt 73
Query: 639 tttcgcactttggtg 653
||| |||||||||||
Sbjct: 72 ttttgcactttggtg 58
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
