NNNNGGACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCATGCACAATCTCAGAATACAGTGGGAGGGGCTGCAGAG
ATGGCTGAGCAGTTAAGAGTAACTGCTGCTCTTGTAGAGGAGCTGAATTT
GGCTCATCACCCACATAGCAGCTCAACCCACTTAAAAAAAAAATTATCTC
ATGTATATGACTACAATGTAGCTGTCTTCAGACATACAGAAGAGGATATC
AGGTCCCATTATAGATGGTTGTGAGCCACCATGTGGTTGTGATTCCTGGG
AACTGAACTCAGGACCTCTGGAAGAGGAAACAGTCCTCTTAACCAGAGCC
ATCTCTCCAGCCTGACTCTAGGAGATAAAACACCTATTTCTGAGCCAGGC
AGTGGTGGCGCGCACCTTTATTCCCAGCACTTGGGAAGCAGAGGCAGGGG
GATTTCTGAGTTCAAGGACAGCCAGGAACTGAGAAACCCTGTCTTGAACC
CCCCTCTGCCCCCCCCCATTTCTGACTTCTGTGGGCACTACACTTCTTGG
GCCCAAACAAAACCAACCGAACCACCTTATAATTTTGAAAAACCCCCCCT
ACCAAAGGGGGGGTAAATGGAAACCACAAAGGCCCTAAACAAGAGAACCC
CCTGGGGCCCTTTTATTCTCCCCTTTCCCAAAAAATGGAAACTTTTTTTT
TAAGGGGACCCCCGTGTCCCCCAAAGGAAAATTTCCCTTTACCN

NGAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTGGGATAGTCAAAGGTACACAGA
GAAACCCTGTCTCAAAACAACAACAACAAAAGAAAAACACACACACACAC
AAAAAAATCAAACACCCCCCAAAAAAAGAAAAGAAAAAGAAAAAGAAAAG
AAAGAGGAAGAGGAAGAGGAAGGAAAGAGAAAAAGAAAAAGAAAAGGAAA
GAGAAAAAGAAAAAGAAGAAGAAAAGGAAAAAGAAAAAGAAAAAGGGAAA
GGAAAAGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAAGAGAAAGA
AAAAGAAAAAGAAAAAGAAGACAATATTTTCCAGGAAAGCTATCTATTCG
AGAGACTTTAACAAGAGTGTAAATACTACCTAAGTATGGTTGGCACAATC
ACTTCACCATTGTCTACCCTCACCTGAGAGCTTGTCTTCTACACTACGCT
TTGTGTAGCTCCCTGGGGGTTGTTTGTTTGTTTGGTTGGTTGGTTTTGAT
TTTGGTTTTGGTTTGTTTTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGC
TGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAATGATCT
CCCTGCCACTACTTCTCCAGTGCTGAGATTAAATGCATGTGCCACCACCG
CCAAGCTAATTTTTTAAAAAAATTATGTGTATAAATGCCTAAATGTATGG
ATGCTGATCACATGTGTGTAGTGACCCTGGAGAGAGTCAGATCTC

Query= MSMg01no530_f11.g1 MSMg01no530_f11.g1 CHROMAT_FILE:
MSMg01no530_f11.g1 PHD_FILE: MSMg01no530_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:37 2005
         (598 letters)



>mm_chr11_51767548_51768544
          Length = 997

 Score =  841 bits (435), Expect = 0.0
 Identities = 568/629 (90%), Gaps = 42/629 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgggatagtcaaaggtacacagagaaaccctgtctcaaaacaacaacaacaaaagaaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tgggatagtcaaaggtacacagagaaaccctgtctcaaaacaacaacaacaaaagaaaaa 245

                                                                       
Query: 61  cacacacacacacaaaaaaa-tcaaacaccccccaaaaaaagaaaagaaaaagaaaaaga 119
                    |||||||||||  |||||| |||||||||||||||||||||||||||||||
Sbjct: 246 ---------acacaaaaaaacccaaaca-cccccaaaaaaagaaaagaaaaagaaaaaga 295

                                                                       
Query: 120 aaagaaagaggaagaggaag---ag-g--aaggaaagagaaaaagaaaaagaa-aag--g 170
           ||||||||||||||||||||   || |  || ||||||||||||||||||||| |||  |
Sbjct: 296 aaagaaagaggaagaggaaggaaagagaaaaagaaagagaaaaagaaaaagaagaagaag 355

                                                                       
Query: 171 a--aag-agaaaaagaaaaagaagaagaa-aag--gaaaaagaaaaaga--aaaagg--- 219
           |  ||| |||| ||||| ||||||||||| |||  ||| ||||| ||||  ||||||   
Sbjct: 356 aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaaaggaaa 415

                                                                       
Query: 220 --g--aaaggaaaagaaaaggaaaaggaaaaggaaaaggaaaaggaaaaagagaaagaaa 275
             |  |||||||||||||| ||||| ||||| ||||| ||||| |||||||| |||||||
Sbjct: 416 aagaaaaaggaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaa 475

                                                                       
Query: 276 aagaaaaagaaaaagaagacaatattttccaggaaagctatctattcgagagactttaac 335
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 476 aagaaaaagaaaaagaagacaatattttccaggaaagctatctatttgagagactttaac 535

                                                                       
Query: 336 aagagtgtaaatactacctaagtatggttggcacaatcacttcaccattgtctaccctca 395
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aagagtgtaaatactacctaagtatggttggcacaatcacttcaccattgtctaccctca 595

                                                                       
Query: 396 cctgagagcttgtcttctacactacgctttgtgtagctccctgggggttgtttgtttgtt 455
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 596 cctgagagcttgtcttctacactacgctttgtgtagctccctgggt-ttgtttgtttgtt 654

                                                                       
Query: 456 tggttggttggttttgattttggttttggttt------gtttttcaagacagggtttctc 509
           || ||  |||||||||||||||||||||||||      ||||||||||||||||| ||||
Sbjct: 655 tgtttacttggttttgattttggttttggttttggtttgtttttcaagacagggtgtctc 714

                                                                       
Query: 510 tgtgtagccctggctgtcctggaactcactctgtagaccaggctggcctcgaactcaatg 569
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tgtgtagccctggctgtcctggaactcactctgtagaccaggctggcctcgaactcaatg 774

                                        
Query: 570 atctccctgccactacttctccagtgctg 598
           |||||||||||||| ||||||||||||||
Sbjct: 775 atctccctgccactgcttctccagtgctg 803


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 115
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 997
Length adjustment: 10
Effective length of query: 588
Effective length of database: 987
Effective search space:   580356
Effective search space used:   580356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)